Detail information of GWHGAAZE005493


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007026917.10NAD(P)-linked oxidoreductase superfamily protein [Theobroma cacao]
Swissprottr|Q0PGJ6|AKRC9_ARATH8E-153Aldo-keto reductase family 4 member C9
trEMBLtr|A0A061EYR7|A0A061EYR7_THECC0NAD(P)-linked oxidoreductase superfamily protein {ECO:0000313|EMBL:EOY07419.1}
TAIR10AT2G37770.22E-122NAD(P)-linked oxidoreductase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene88557948859327-
GWHAAZE00000002mRNA88557948859327-
GWHAAZE00000002exon88586598859327-
GWHAAZE00000002exon88579248857974-
GWHAAZE00000002exon88572488857324-
GWHAAZE00000002exon88570218857108-
GWHAAZE00000002exon88565368856811-
GWHAAZE00000002exon88562028856447-
GWHAAZE00000002exon88557948856106-
GWHAAZE00000002five_prime_UTR88587888859327-
GWHAAZE00000002CDS88586598858787-
GWHAAZE00000002CDS88579248857974-
GWHAAZE00000002CDS88572488857324-
GWHAAZE00000002CDS88570218857108-
GWHAAZE00000002CDS88565368856811-
GWHAAZE00000002CDS88562028856447-
GWHAAZE00000002CDS88560208856106-
GWHAAZE00000002three_prime_UTR88557948856019-
Transcript Sequence

Network for GWHGAAZE005493

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00248.22Aldo_ket_red332822.00E-48
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00002AKR1A1, adh Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Pentose and glucuronate interconversionsmap00040
Glycerolipid metabolismmap00561
Caprolactam degradationmap00930

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.279
SRR3591706second leaf0.923
SRR3591707mature leaf0.066
SRR3591708Shoot apex1.625
SRR3591709Stem0.519
SRR3591710White floral bud1.125
SRR3591711White flower1.022
SRR3591712Green floral bud15.315
SRR3591713Yellow flower2.565
SRP173429 SRR8316895Juvenile bud stage 3.469
SRR8316896Juvenile bud stage 7.691
SRR8316897Juvenile bud stage 3.775
SRR8316894Third green stage 5.431
SRR8316900Third green stage 28.003
SRR8316901Third green stage 25.904
SRR8316898Complete white stage 1.937
SRR8316899Complete white stage 5.501
SRR8316903Complete white stage 2.972
SRR8316902Silver flowering stage1.681
SRR8316904Silver flowering stage1.994
SRR8316905Silver flowering stage1.074
SRR8316906Gold flowering stage 1.903
SRR8316907Gold flowering stage 3.002
SRR8316908Gold flowering stage 2.774
SRP132670SRR6706286Control12.820
SRR6706287Light intensity 50%13.248
SRR6706288Light intensity 20%11.824
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.872
CNS0095593Slightly white alabastrum(diploid) 212.348
CNS0095594Slightly white alabastrum(diploid) 312.427
CNS0095595Whole white alabastrum(diploid) 219.346
CNS0095596Whole white alabastrum(diploid) 319.957
CNS0095597Whole white alabastrum(diploid) 415.031
CNS0095598Silvery flower (diploied) 13.737
CNS0095599Silvery flower (diploied) 23.465
CNS0095600Silvery flower (diploied) 33.803
CNS0095601Golden flower (diploid) 14.012
CNS0095602Golden flower (diploid) 23.532
CNS0095603Golden flower (diploid) 32.887
CNS0095604Slightly white alabastrum(tetraploid) 120.260
CNS0095605Slightly white alabastrum(tetraploid) 217.964
CNS0095606Slightly white alabastrum(tetraploid) 35.086
CNS0095607Whole white alabastrum(tetraploid) 125.810
CNS0095608Whole white alabastrum(tetraploid) 223.356
CNS0095609Whole white alabastrum(tetraploid) 324.800
CNS0095610Silvery flower (tetraploid) 13.280
CNS0095611Silvery flower (tetraploid) 23.923
CNS0095612Silvery flower (tetraploid) 33.746
CNS0095613Golden flower (tetraploid) 11.746
CNS0095614Golden flower (tetraploid) 23.102
CNS0095615Golden flower (tetraploid) 33.400
CRA001975CRR073297Stem 17.296
CRR073298Stem 27.157
CRR073299Stem 35.877
CRR073300Leaf 112.889
CRR073301Leaf 214.666
CRR073302Leaf 313.136
CRR073303Juvenile bud 110.876
CRR073304Juvenile bud 28.171
CRR073305Juvenile bud 35.078
CRR073306Third green 13.106
CRR073307Third green 24.154
CRR073308Third green 32.768
CRR073309Second white 12.083
CRR073310Second white 21.170
CRR073311Second white 31.718
CRR073312Silver flowering 11.768
CRR073313Silver flowering 21.928
CRR073314Silver flowering 31.213
CRR073315Gold flowering 14.084
CRR073316Gold flowering 21.753
CRR073317Gold flowering 32.318
CRR073318Tawny withering 13.777
CRR073319Tawny withering 23.806
CRR073320Tawny withering 33.755