Detail information of GWHGAAZE005495


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002879708.12.9269E-180oxidoreductase [Arabidopsis lyrata subsp. lyrata]
Swissprottr|Q0PGJ6|AKRC9_ARATH4E-179Aldo-keto reductase family 4 member C9
trEMBLtr|D7LKP8|D7LKP8_ARALL1E-180Oxidoreductase {ECO:0000313|EMBL:EFH55967.1}
TAIR10AT2G37770.21E-142NAD(P)-linked oxidoreductase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene88765898880194-
GWHAAZE00000002mRNA88765898880194-
GWHAAZE00000002exon88765898876690-
GWHAAZE00000002exon88772448877492-
GWHAAZE00000002exon88775838877858-
GWHAAZE00000002exon88780988878185-
GWHAAZE00000002exon88783458878421-
GWHAAZE00000002exon88789288878978-
GWHAAZE00000002exon88800758880194-
GWHAAZE00000002CDS88800758880194-
GWHAAZE00000002CDS88789288878978-
GWHAAZE00000002CDS88783458878421-
GWHAAZE00000002CDS88780988878185-
GWHAAZE00000002CDS88775838877858-
GWHAAZE00000002CDS88772448877492-
GWHAAZE00000002CDS88765898876690-
Transcript Sequence

Network for GWHGAAZE005495

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00248.22Aldo_ket_red192862.10E-49
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00002AKR1A1, adh Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Pentose and glucuronate interconversionsmap00040
Glycerolipid metabolismmap00561
Caprolactam degradationmap00930

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf606.194
SRR3591706second leaf220.680
SRR3591707mature leaf247.320
SRR3591708Shoot apex305.149
SRR3591709Stem721.395
SRR3591710White floral bud690.302
SRR3591711White flower2226.420
SRR3591712Green floral bud191.992
SRR3591713Yellow flower8453.261
SRP173429 SRR8316895Juvenile bud stage 264.842
SRR8316896Juvenile bud stage 338.430
SRR8316897Juvenile bud stage 217.217
SRR8316894Third green stage 159.316
SRR8316900Third green stage 543.314
SRR8316901Third green stage 554.110
SRR8316898Complete white stage 514.373
SRR8316899Complete white stage 650.642
SRR8316903Complete white stage 729.754
SRR8316902Silver flowering stage575.547
SRR8316904Silver flowering stage729.389
SRR8316905Silver flowering stage519.423
SRR8316906Gold flowering stage 1874.989
SRR8316907Gold flowering stage 1646.799
SRR8316908Gold flowering stage 2031.574
SRP132670SRR6706286Control570.251
SRR6706287Light intensity 50%460.690
SRR6706288Light intensity 20%460.488
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1458.693
CNS0095593Slightly white alabastrum(diploid) 2357.605
CNS0095594Slightly white alabastrum(diploid) 3362.225
CNS0095595Whole white alabastrum(diploid) 2317.792
CNS0095596Whole white alabastrum(diploid) 3343.862
CNS0095597Whole white alabastrum(diploid) 4322.852
CNS0095598Silvery flower (diploied) 11218.728
CNS0095599Silvery flower (diploied) 21360.935
CNS0095600Silvery flower (diploied) 32874.044
CNS0095601Golden flower (diploid) 11910.986
CNS0095602Golden flower (diploid) 24395.188
CNS0095603Golden flower (diploid) 34293.403
CNS0095604Slightly white alabastrum(tetraploid) 1373.881
CNS0095605Slightly white alabastrum(tetraploid) 2347.442
CNS0095606Slightly white alabastrum(tetraploid) 3522.057
CNS0095607Whole white alabastrum(tetraploid) 1257.893
CNS0095608Whole white alabastrum(tetraploid) 2230.615
CNS0095609Whole white alabastrum(tetraploid) 3393.782
CNS0095610Silvery flower (tetraploid) 12497.509
CNS0095611Silvery flower (tetraploid) 23160.278
CNS0095612Silvery flower (tetraploid) 32101.955
CNS0095613Golden flower (tetraploid) 12655.208
CNS0095614Golden flower (tetraploid) 23254.232
CNS0095615Golden flower (tetraploid) 35230.224
CRA001975CRR073297Stem 1480.230
CRR073298Stem 2481.895
CRR073299Stem 3684.581
CRR073300Leaf 1637.336
CRR073301Leaf 2647.980
CRR073302Leaf 3795.215
CRR073303Juvenile bud 1876.595
CRR073304Juvenile bud 21141.617
CRR073305Juvenile bud 31086.626
CRR073306Third green 1658.826
CRR073307Third green 2873.942
CRR073308Third green 3579.371
CRR073309Second white 12360.152
CRR073310Second white 2757.178
CRR073311Second white 3634.049
CRR073312Silver flowering 11581.707
CRR073313Silver flowering 22224.410
CRR073314Silver flowering 32278.210
CRR073315Gold flowering 1293.800
CRR073316Gold flowering 2318.089
CRR073317Gold flowering 3397.010
CRR073318Tawny withering 1761.012
CRR073319Tawny withering 2627.657
CRR073320Tawny withering 3466.342