Detail information of GWHGAAZE005496


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002272909.10PREDICTED: aldo-keto reductase family 4 member C9-like [Vitis vinifera]
Swissprottr|Q0PGJ6|AKRC9_ARATH0Aldo-keto reductase family 4 member C9
trEMBLtr|F6HL42|F6HL42_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB55559.1}
TAIR10AT2G37770.23E-135NAD(P)-linked oxidoreductase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene88875728890751-
GWHAAZE00000002mRNA88875728890751-
GWHAAZE00000002exon88875728887877-
GWHAAZE00000002exon88882358888510-
GWHAAZE00000002exon88890208889107-
GWHAAZE00000002exon88896108889686-
GWHAAZE00000002exon88899218889971-
GWHAAZE00000002exon88906328890751-
GWHAAZE00000002CDS88906328890751-
GWHAAZE00000002CDS88899218889971-
GWHAAZE00000002CDS88896108889686-
GWHAAZE00000002CDS88890208889107-
GWHAAZE00000002CDS88882358888510-
GWHAAZE00000002CDS88875728887877-
Transcript Sequence

Network for GWHGAAZE005496

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00248.22Aldo_ket_red192823.50E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00002AKR1A1, adh Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Pentose and glucuronate interconversionsmap00040
Glycerolipid metabolismmap00561
Caprolactam degradationmap00930

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf47.032
SRR3591706second leaf23.849
SRR3591707mature leaf24.579
SRR3591708Shoot apex55.930
SRR3591709Stem44.506
SRR3591710White floral bud39.257
SRR3591711White flower58.029
SRR3591712Green floral bud71.241
SRR3591713Yellow flower108.746
SRP173429 SRR8316895Juvenile bud stage 54.275
SRR8316896Juvenile bud stage 81.113
SRR8316897Juvenile bud stage 36.690
SRR8316894Third green stage 33.949
SRR8316900Third green stage 95.623
SRR8316901Third green stage 87.795
SRR8316898Complete white stage 29.295
SRR8316899Complete white stage 89.450
SRR8316903Complete white stage 38.887
SRR8316902Silver flowering stage21.858
SRR8316904Silver flowering stage24.160
SRR8316905Silver flowering stage13.202
SRR8316906Gold flowering stage 44.171
SRR8316907Gold flowering stage 47.263
SRR8316908Gold flowering stage 46.076
SRP132670SRR6706286Control90.884
SRR6706287Light intensity 50%96.702
SRR6706288Light intensity 20%101.188
CNP0000432CNS0095592Slightly white alabastrum(diploid) 168.967
CNS0095593Slightly white alabastrum(diploid) 265.403
CNS0095594Slightly white alabastrum(diploid) 362.794
CNS0095595Whole white alabastrum(diploid) 254.332
CNS0095596Whole white alabastrum(diploid) 366.782
CNS0095597Whole white alabastrum(diploid) 446.195
CNS0095598Silvery flower (diploied) 142.393
CNS0095599Silvery flower (diploied) 246.018
CNS0095600Silvery flower (diploied) 370.887
CNS0095601Golden flower (diploid) 146.538
CNS0095602Golden flower (diploid) 277.670
CNS0095603Golden flower (diploid) 371.003
CNS0095604Slightly white alabastrum(tetraploid) 159.397
CNS0095605Slightly white alabastrum(tetraploid) 256.709
CNS0095606Slightly white alabastrum(tetraploid) 357.234
CNS0095607Whole white alabastrum(tetraploid) 148.373
CNS0095608Whole white alabastrum(tetraploid) 241.489
CNS0095609Whole white alabastrum(tetraploid) 366.505
CNS0095610Silvery flower (tetraploid) 138.671
CNS0095611Silvery flower (tetraploid) 250.572
CNS0095612Silvery flower (tetraploid) 342.177
CNS0095613Golden flower (tetraploid) 122.270
CNS0095614Golden flower (tetraploid) 231.548
CNS0095615Golden flower (tetraploid) 344.014
CRA001975CRR073297Stem 1102.737
CRR073298Stem 297.586
CRR073299Stem 3118.890
CRR073300Leaf 198.451
CRR073301Leaf 2109.591
CRR073302Leaf 3124.136
CRR073303Juvenile bud 1104.833
CRR073304Juvenile bud 291.716
CRR073305Juvenile bud 3125.058
CRR073306Third green 133.105
CRR073307Third green 229.250
CRR073308Third green 330.217
CRR073309Second white 154.410
CRR073310Second white 226.304
CRR073311Second white 326.152
CRR073312Silver flowering 121.628
CRR073313Silver flowering 236.211
CRR073314Silver flowering 331.869
CRR073315Gold flowering 181.234
CRR073316Gold flowering 268.653
CRR073317Gold flowering 371.513
CRR073318Tawny withering 157.364
CRR073319Tawny withering 258.622
CRR073320Tawny withering 357.320