Detail information of GWHGAAZE005554


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011085385.11.16684E-30PREDICTED: eukaryotic translation initiation factor 3 subunit A [Sesamum indicum]
Swissprottr|Q40554|EIF3A_TOBAC1E-14Eukaryotic translation initiation factor 3 subunit A {ECO:0000255|HAMAP-Rule:MF_03000}
trEMBLtr|A0A068UEM0|A0A068UEM0_COFCA2E-29Eukaryotic translation initiation factor 3 subunit A {ECO:0000256|HAMAP-Rule:MF_03000, ECO:0000256|SAAS:SAAS00003684}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene99150359915499-
GWHAAZE00000002mRNA99150359915499-
GWHAAZE00000002exon99150359915499-
GWHAAZE00000002CDS99150359915499-
Transcript Sequence

Network for GWHGAAZE005554

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03254EIF3A RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.301
SRR3591706second leaf1.186
SRR3591707mature leaf0.568
SRR3591708Shoot apex2.062
SRR3591709Stem3.837
SRR3591710White floral bud5.982
SRR3591711White flower5.555
SRR3591712Green floral bud12.102
SRR3591713Yellow flower3.562
SRP173429 SRR8316895Juvenile bud stage 19.092
SRR8316896Juvenile bud stage 49.172
SRR8316897Juvenile bud stage 14.790
SRR8316894Third green stage 11.032
SRR8316900Third green stage 26.707
SRR8316901Third green stage 31.054
SRR8316898Complete white stage 2.643
SRR8316899Complete white stage 3.180
SRR8316903Complete white stage 4.749
SRR8316902Silver flowering stage7.488
SRR8316904Silver flowering stage7.146
SRR8316905Silver flowering stage2.306
SRR8316906Gold flowering stage 10.112
SRR8316907Gold flowering stage 12.820
SRR8316908Gold flowering stage 7.549
SRP132670SRR6706286Control16.804
SRR6706287Light intensity 50%15.381
SRR6706288Light intensity 20%12.523
CNP0000432CNS0095592Slightly white alabastrum(diploid) 157.084
CNS0095593Slightly white alabastrum(diploid) 237.324
CNS0095594Slightly white alabastrum(diploid) 377.712
CNS0095595Whole white alabastrum(diploid) 247.709
CNS0095596Whole white alabastrum(diploid) 359.409
CNS0095597Whole white alabastrum(diploid) 448.679
CNS0095598Silvery flower (diploied) 12.458
CNS0095599Silvery flower (diploied) 26.377
CNS0095600Silvery flower (diploied) 38.012
CNS0095601Golden flower (diploid) 13.677
CNS0095602Golden flower (diploid) 25.261
CNS0095603Golden flower (diploid) 34.399
CNS0095604Slightly white alabastrum(tetraploid) 163.482
CNS0095605Slightly white alabastrum(tetraploid) 271.104
CNS0095606Slightly white alabastrum(tetraploid) 34.578
CNS0095607Whole white alabastrum(tetraploid) 168.062
CNS0095608Whole white alabastrum(tetraploid) 258.278
CNS0095609Whole white alabastrum(tetraploid) 335.614
CNS0095610Silvery flower (tetraploid) 118.189
CNS0095611Silvery flower (tetraploid) 211.001
CNS0095612Silvery flower (tetraploid) 326.380
CNS0095613Golden flower (tetraploid) 18.555
CNS0095614Golden flower (tetraploid) 29.407
CNS0095615Golden flower (tetraploid) 36.483
CRA001975CRR073297Stem 132.753
CRR073298Stem 232.938
CRR073299Stem 318.774
CRR073300Leaf 126.779
CRR073301Leaf 229.535
CRR073302Leaf 313.641
CRR073303Juvenile bud 114.296
CRR073304Juvenile bud 210.223
CRR073305Juvenile bud 38.350
CRR073306Third green 17.932
CRR073307Third green 210.510
CRR073308Third green 311.883
CRR073309Second white 14.144
CRR073310Second white 210.019
CRR073311Second white 39.207
CRR073312Silver flowering 15.882
CRR073313Silver flowering 24.229
CRR073314Silver flowering 34.250
CRR073315Gold flowering 12.813
CRR073316Gold flowering 21.521
CRR073317Gold flowering 30.000
CRR073318Tawny withering 12.739
CRR073319Tawny withering 23.459
CRR073320Tawny withering 34.557