Detail information of GWHGAAZE005577


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011077417.10PREDICTED: exocyst complex component EXO70A1-like [Sesamum indicum]
Swissprottr|Q9LZD3|E70A1_ARATH6E-85Exocyst complex component EXO70A1
trEMBLtr|F6HQX6|F6HQX6_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB57025.1}
TAIR10AT3G09520.10exocyst subunit exo70 family protein H4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1021859610220458+
GWHAAZE00000002mRNA1021859610220458+
GWHAAZE00000002exon1021859610220458+
GWHAAZE00000002CDS1021859610220458+
Transcript Sequence

Network for GWHGAAZE005577

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03081.16Exo702386002.80E-104
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07195EXOC7, EXO70 Insulin signaling pathway map04910

Gene Ontology

GO term OntologyName
GO:0006887biological_processexocytosis
GO:0000145cellular_componentexocyst

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE005577.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 301234567891011Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.829
SRR3591706second leaf1.798
SRR3591707mature leaf1.443
SRR3591708Shoot apex1.729
SRR3591709Stem4.150
SRR3591710White floral bud4.217
SRR3591711White flower2.380
SRR3591712Green floral bud3.596
SRR3591713Yellow flower2.443
SRP173429 SRR8316895Juvenile bud stage 1.288
SRR8316896Juvenile bud stage 2.298
SRR8316897Juvenile bud stage 0.624
SRR8316894Third green stage 1.050
SRR8316900Third green stage 2.273
SRR8316901Third green stage 1.864
SRR8316898Complete white stage 0.763
SRR8316899Complete white stage 3.288
SRR8316903Complete white stage 1.227
SRR8316902Silver flowering stage0.477
SRR8316904Silver flowering stage0.724
SRR8316905Silver flowering stage0.472
SRR8316906Gold flowering stage 3.948
SRR8316907Gold flowering stage 1.979
SRR8316908Gold flowering stage 7.828
SRP132670SRR6706286Control2.056
SRR6706287Light intensity 50%1.936
SRR6706288Light intensity 20%1.971
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.747
CNS0095593Slightly white alabastrum(diploid) 21.097
CNS0095594Slightly white alabastrum(diploid) 31.085
CNS0095595Whole white alabastrum(diploid) 20.725
CNS0095596Whole white alabastrum(diploid) 30.434
CNS0095597Whole white alabastrum(diploid) 41.012
CNS0095598Silvery flower (diploied) 11.661
CNS0095599Silvery flower (diploied) 21.401
CNS0095600Silvery flower (diploied) 31.543
CNS0095601Golden flower (diploid) 11.476
CNS0095602Golden flower (diploid) 21.284
CNS0095603Golden flower (diploid) 31.199
CNS0095604Slightly white alabastrum(tetraploid) 11.499
CNS0095605Slightly white alabastrum(tetraploid) 20.725
CNS0095606Slightly white alabastrum(tetraploid) 34.001
CNS0095607Whole white alabastrum(tetraploid) 10.954
CNS0095608Whole white alabastrum(tetraploid) 20.637
CNS0095609Whole white alabastrum(tetraploid) 31.405
CNS0095610Silvery flower (tetraploid) 10.740
CNS0095611Silvery flower (tetraploid) 20.378
CNS0095612Silvery flower (tetraploid) 30.597
CNS0095613Golden flower (tetraploid) 10.657
CNS0095614Golden flower (tetraploid) 21.348
CNS0095615Golden flower (tetraploid) 30.291
CRA001975CRR073297Stem 12.837
CRR073298Stem 22.390
CRR073299Stem 32.998
CRR073300Leaf 14.171
CRR073301Leaf 23.394
CRR073302Leaf 32.615
CRR073303Juvenile bud 15.199
CRR073304Juvenile bud 22.957
CRR073305Juvenile bud 34.693
CRR073306Third green 11.557
CRR073307Third green 22.512
CRR073308Third green 32.282
CRR073309Second white 11.079
CRR073310Second white 21.870
CRR073311Second white 31.016
CRR073312Silver flowering 15.468
CRR073313Silver flowering 24.785
CRR073314Silver flowering 36.558
CRR073315Gold flowering 11.632
CRR073316Gold flowering 21.677
CRR073317Gold flowering 30.839
CRR073318Tawny withering 17.295
CRR073319Tawny withering 210.034
CRR073320Tawny withering 33.844