Detail information of GWHGAAZE005602


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007027200.11.55812E-50Sensory transduction histidine kinase, putative isoform 4 [Theobroma cacao]
Swissprottr|Q93WK5|APRR7_ARATH5E-19Two-component response regulator-like APRR7
trEMBLtr|A0A061ESU9|A0A061ESU9_THECC6E-51Sensory transduction histidine kinase, putative isoform 4 {ECO:0000313|EMBL:EOY07702.1}
TAIR10AT5G02810.12E-16pseudo-response regulator 7

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1055141210553232-
GWHAAZE00000002mRNA1055141210553232-
GWHAAZE00000002exon1055250410553232-
GWHAAZE00000002exon1055141210551745-
GWHAAZE00000002CDS1055250410553232-
GWHAAZE00000002CDS1055164710551745-
GWHAAZE00000002three_prime_UTR1055141210551646-
Transcript Sequence

Network for GWHGAAZE005602

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0031


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06203.15CCT2242661.70E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
K12129PRR7 Circadian rhythm - plant map04712

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.453
SRR3591706second leaf13.917
SRR3591707mature leaf20.811
SRR3591708Shoot apex16.274
SRR3591709Stem32.251
SRR3591710White floral bud28.715
SRR3591711White flower32.276
SRR3591712Green floral bud27.547
SRR3591713Yellow flower15.728
SRP173429 SRR8316895Juvenile bud stage 13.094
SRR8316896Juvenile bud stage 17.003
SRR8316897Juvenile bud stage 9.126
SRR8316894Third green stage 11.911
SRR8316900Third green stage 33.252
SRR8316901Third green stage 36.917
SRR8316898Complete white stage 10.132
SRR8316899Complete white stage 47.687
SRR8316903Complete white stage 20.319
SRR8316902Silver flowering stage10.772
SRR8316904Silver flowering stage14.135
SRR8316905Silver flowering stage7.475
SRR8316906Gold flowering stage 12.746
SRR8316907Gold flowering stage 15.751
SRR8316908Gold flowering stage 16.421
SRP132670SRR6706286Control18.175
SRR6706287Light intensity 50%20.824
SRR6706288Light intensity 20%21.511
CNP0000432CNS0095592Slightly white alabastrum(diploid) 128.966
CNS0095593Slightly white alabastrum(diploid) 231.987
CNS0095594Slightly white alabastrum(diploid) 323.061
CNS0095595Whole white alabastrum(diploid) 227.458
CNS0095596Whole white alabastrum(diploid) 321.882
CNS0095597Whole white alabastrum(diploid) 422.828
CNS0095598Silvery flower (diploied) 126.302
CNS0095599Silvery flower (diploied) 222.368
CNS0095600Silvery flower (diploied) 324.315
CNS0095601Golden flower (diploid) 118.629
CNS0095602Golden flower (diploid) 216.742
CNS0095603Golden flower (diploid) 318.315
CNS0095604Slightly white alabastrum(tetraploid) 128.024
CNS0095605Slightly white alabastrum(tetraploid) 222.122
CNS0095606Slightly white alabastrum(tetraploid) 333.030
CNS0095607Whole white alabastrum(tetraploid) 118.062
CNS0095608Whole white alabastrum(tetraploid) 218.145
CNS0095609Whole white alabastrum(tetraploid) 325.600
CNS0095610Silvery flower (tetraploid) 124.129
CNS0095611Silvery flower (tetraploid) 220.942
CNS0095612Silvery flower (tetraploid) 322.699
CNS0095613Golden flower (tetraploid) 116.676
CNS0095614Golden flower (tetraploid) 222.374
CNS0095615Golden flower (tetraploid) 38.281
CRA001975CRR073297Stem 123.219
CRR073298Stem 221.190
CRR073299Stem 313.435
CRR073300Leaf 126.062
CRR073301Leaf 225.605
CRR073302Leaf 311.731
CRR073303Juvenile bud 117.953
CRR073304Juvenile bud 28.084
CRR073305Juvenile bud 315.595
CRR073306Third green 13.118
CRR073307Third green 23.541
CRR073308Third green 33.163
CRR073309Second white 13.105
CRR073310Second white 26.138
CRR073311Second white 33.211
CRR073312Silver flowering 13.624
CRR073313Silver flowering 21.569
CRR073314Silver flowering 33.420
CRR073315Gold flowering 116.728
CRR073316Gold flowering 223.493
CRR073317Gold flowering 38.704
CRR073318Tawny withering 126.968
CRR073319Tawny withering 234.077
CRR073320Tawny withering 331.311