Detail information of GWHGAAZE005677


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU38573.12.02018E-28hypothetical protein MIMGU_mgv1a011310mg [Erythranthe guttata]
trEMBLtr|A0A022RFN7|A0A022RFN7_ERYGU8E-29Uncharacterized protein {ECO:0000313|EMBL:EYU38573.1}
TAIR10AT5G25560.36E-20CHY-type/CTCHY-type/RING-type Zinc finger protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1182442111827784+
GWHAAZE00000002mRNA1182442111827784+
GWHAAZE00000002exon1182442111824521+
GWHAAZE00000002exon1182459111824677+
GWHAAZE00000002exon1182540611825438+
GWHAAZE00000002exon1182570011825777+
GWHAAZE00000002exon1182586311825906+
GWHAAZE00000002exon1182689411826984+
GWHAAZE00000002exon1182711611827185+
GWHAAZE00000002exon1182760711827648+
GWHAAZE00000002exon1182774911827784+
GWHAAZE00000002five_prime_UTR1182442111824495+
GWHAAZE00000002CDS1182449611824521+
GWHAAZE00000002CDS1182459111824677+
GWHAAZE00000002CDS1182540611825438+
GWHAAZE00000002CDS1182570011825777+
GWHAAZE00000002CDS1182586311825906+
GWHAAZE00000002CDS1182689411826984+
GWHAAZE00000002CDS1182711611827185+
GWHAAZE00000002CDS1182760711827648+
GWHAAZE00000002CDS1182774911827784+
Transcript Sequence

Network for GWHGAAZE005677

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00097.26zf-C3HC4981260.0002
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
K10144RCHY1, PIRH2 Ubiquitin mediated proteolysis map04120
p53 signaling pathwaymap04115

Gene Ontology

GO term OntologyName
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.223
SRR3591706second leaf0.113
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.440
SRR3591709Stem0.036
SRR3591710White floral bud5.270
SRR3591711White flower0.036
SRR3591712Green floral bud2.142
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.147
SRR8316896Juvenile bud stage 0.956
SRR8316897Juvenile bud stage 2.855
SRR8316894Third green stage 0.564
SRR8316900Third green stage 1.357
SRR8316901Third green stage 2.044
SRR8316898Complete white stage 0.086
SRR8316899Complete white stage 0.087
SRR8316903Complete white stage 0.408
SRR8316902Silver flowering stage0.505
SRR8316904Silver flowering stage0.864
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.774
SRR6706287Light intensity 50%2.077
SRR6706288Light intensity 20%1.427
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.239
CNS0095593Slightly white alabastrum(diploid) 22.311
CNS0095594Slightly white alabastrum(diploid) 33.153
CNS0095595Whole white alabastrum(diploid) 25.926
CNS0095596Whole white alabastrum(diploid) 37.658
CNS0095597Whole white alabastrum(diploid) 48.639
CNS0095598Silvery flower (diploied) 10.219
CNS0095599Silvery flower (diploied) 20.216
CNS0095600Silvery flower (diploied) 30.110
CNS0095601Golden flower (diploid) 10.220
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.025
CNS0095604Slightly white alabastrum(tetraploid) 16.643
CNS0095605Slightly white alabastrum(tetraploid) 25.649
CNS0095606Slightly white alabastrum(tetraploid) 33.132
CNS0095607Whole white alabastrum(tetraploid) 19.406
CNS0095608Whole white alabastrum(tetraploid) 29.589
CNS0095609Whole white alabastrum(tetraploid) 34.202
CNS0095610Silvery flower (tetraploid) 10.221
CNS0095611Silvery flower (tetraploid) 20.290
CNS0095612Silvery flower (tetraploid) 30.229
CNS0095613Golden flower (tetraploid) 10.036
CNS0095614Golden flower (tetraploid) 20.046
CNS0095615Golden flower (tetraploid) 30.578
CRA001975CRR073297Stem 10.076
CRR073298Stem 20.372
CRR073299Stem 30.211
CRR073300Leaf 12.821
CRR073301Leaf 21.253
CRR073302Leaf 30.914
CRR073303Juvenile bud 11.124
CRR073304Juvenile bud 21.343
CRR073305Juvenile bud 30.239
CRR073306Third green 10.313
CRR073307Third green 20.875
CRR073308Third green 31.208
CRR073309Second white 10.000
CRR073310Second white 20.106
CRR073311Second white 30.091
CRR073312Silver flowering 10.231
CRR073313Silver flowering 20.180
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.011
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 12.541
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.387