Detail information of GWHGAAZE005693


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011075421.10PREDICTED: transcription factor-like protein DPB isoform X1 [Sesamum indicum]
Swissprottr|Q9FNY2|DPB_ARATH6E-163Transcription factor-like protein DPB
trEMBLtr|A0A068UPL1|A0A068UPL1_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_39 {ECO:0000313|EMBL:CDP09563.1}
TAIR10AT5G03415.12E-106Transcription factor DP

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1215426512161628-
GWHAAZE00000002mRNA1215426512161628-
GWHAAZE00000002exon1216124212161628-
GWHAAZE00000002exon1216090012160979-
GWHAAZE00000002exon1216051912160562-
GWHAAZE00000002exon1215691312156975-
GWHAAZE00000002exon1215663812156784-
GWHAAZE00000002exon1215649312156561-
GWHAAZE00000002exon1215622112156319-
GWHAAZE00000002exon1215462612154696-
GWHAAZE00000002exon1215426512154508-
GWHAAZE00000002five_prime_UTR1216150212161628-
GWHAAZE00000002CDS1216124212161501-
GWHAAZE00000002CDS1216090012160979-
GWHAAZE00000002CDS1216051912160562-
GWHAAZE00000002CDS1215691312156975-
GWHAAZE00000002CDS1215663812156784-
GWHAAZE00000002CDS1215649312156561-
GWHAAZE00000002CDS1215622112156319-
GWHAAZE00000002CDS1215462612154696-
GWHAAZE00000002CDS1215426512154508-
Transcript Sequence

Network for GWHGAAZE005693

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02319.21E2F_TDP1051852.40E-20
PF08781.11DP1933006.90E-41
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyE2F-DP

KEGG pathway

KO Enzyme pathway mapID
K04683TFDP1 TGF-beta signaling pathway map04350
Cell cyclemap04110

Gene Ontology

GO term OntologyName
GO:0051726biological_processregulation of cell cycle
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0005667cellular_componenttranscription regulator complex
GO:0003700molecular_functionDNA-binding transcription factor activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.279
SRR3591706second leaf7.653
SRR3591707mature leaf12.721
SRR3591708Shoot apex19.250
SRR3591709Stem13.876
SRR3591710White floral bud15.076
SRR3591711White flower16.817
SRR3591712Green floral bud16.751
SRR3591713Yellow flower14.987
SRP173429 SRR8316895Juvenile bud stage 10.377
SRR8316896Juvenile bud stage 14.382
SRR8316897Juvenile bud stage 7.168
SRR8316894Third green stage 5.063
SRR8316900Third green stage 16.358
SRR8316901Third green stage 15.108
SRR8316898Complete white stage 8.470
SRR8316899Complete white stage 30.694
SRR8316903Complete white stage 11.785
SRR8316902Silver flowering stage5.928
SRR8316904Silver flowering stage8.936
SRR8316905Silver flowering stage4.334
SRR8316906Gold flowering stage 14.977
SRR8316907Gold flowering stage 11.247
SRR8316908Gold flowering stage 13.179
SRP132670SRR6706286Control21.141
SRR6706287Light intensity 50%22.927
SRR6706288Light intensity 20%23.060
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.630
CNS0095593Slightly white alabastrum(diploid) 212.090
CNS0095594Slightly white alabastrum(diploid) 311.368
CNS0095595Whole white alabastrum(diploid) 211.102
CNS0095596Whole white alabastrum(diploid) 310.640
CNS0095597Whole white alabastrum(diploid) 410.045
CNS0095598Silvery flower (diploied) 111.994
CNS0095599Silvery flower (diploied) 212.703
CNS0095600Silvery flower (diploied) 314.270
CNS0095601Golden flower (diploid) 114.035
CNS0095602Golden flower (diploid) 215.413
CNS0095603Golden flower (diploid) 314.881
CNS0095604Slightly white alabastrum(tetraploid) 111.267
CNS0095605Slightly white alabastrum(tetraploid) 29.997
CNS0095606Slightly white alabastrum(tetraploid) 317.547
CNS0095607Whole white alabastrum(tetraploid) 17.185
CNS0095608Whole white alabastrum(tetraploid) 26.907
CNS0095609Whole white alabastrum(tetraploid) 311.326
CNS0095610Silvery flower (tetraploid) 113.472
CNS0095611Silvery flower (tetraploid) 213.745
CNS0095612Silvery flower (tetraploid) 37.444
CNS0095613Golden flower (tetraploid) 17.838
CNS0095614Golden flower (tetraploid) 210.145
CNS0095615Golden flower (tetraploid) 310.541
CRA001975CRR073297Stem 113.841
CRR073298Stem 214.919
CRR073299Stem 314.596
CRR073300Leaf 115.383
CRR073301Leaf 214.839
CRR073302Leaf 314.018
CRR073303Juvenile bud 115.370
CRR073304Juvenile bud 210.652
CRR073305Juvenile bud 316.911
CRR073306Third green 12.947
CRR073307Third green 22.957
CRR073308Third green 33.260
CRR073309Second white 15.143
CRR073310Second white 23.632
CRR073311Second white 33.100
CRR073312Silver flowering 13.592
CRR073313Silver flowering 22.485
CRR073314Silver flowering 32.498
CRR073315Gold flowering 17.661
CRR073316Gold flowering 214.528
CRR073317Gold flowering 313.889
CRR073318Tawny withering 118.497
CRR073319Tawny withering 210.987
CRR073320Tawny withering 312.840