Detail information of GWHGAAZE005704


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010241634.19.8392E-104PREDICTED: dnaJ homolog subfamily C member 28-like [Nelumbo nucifera]
trEMBLtr|A0A067JZD2|A0A067JZD2_JATCU2E-103Uncharacterized protein {ECO:0000313|EMBL:KDP29207.1}
TAIR10AT5G03560.13E-68Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1240327812404507-
GWHAAZE00000002mRNA1240327812404507-
GWHAAZE00000002exon1240422712404507-
GWHAAZE00000002exon1240363312403963-
GWHAAZE00000002exon1240327812403503-
GWHAAZE00000002CDS1240422712404507-
GWHAAZE00000002CDS1240363312403963-
GWHAAZE00000002CDS1240339912403503-
GWHAAZE00000002three_prime_UTR1240327812403398-
Transcript Sequence

Network for GWHGAAZE005704

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09350.11DUF19921031652.00E-20
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.751
SRR3591706second leaf20.492
SRR3591707mature leaf38.648
SRR3591708Shoot apex17.332
SRR3591709Stem21.949
SRR3591710White floral bud31.504
SRR3591711White flower61.915
SRR3591712Green floral bud23.602
SRR3591713Yellow flower52.161
SRP173429 SRR8316895Juvenile bud stage 20.735
SRR8316896Juvenile bud stage 24.581
SRR8316897Juvenile bud stage 16.132
SRR8316894Third green stage 9.094
SRR8316900Third green stage 25.358
SRR8316901Third green stage 29.505
SRR8316898Complete white stage 20.241
SRR8316899Complete white stage 39.769
SRR8316903Complete white stage 29.963
SRR8316902Silver flowering stage31.503
SRR8316904Silver flowering stage33.457
SRR8316905Silver flowering stage21.083
SRR8316906Gold flowering stage 64.889
SRR8316907Gold flowering stage 61.396
SRR8316908Gold flowering stage 67.266
SRP132670SRR6706286Control38.069
SRR6706287Light intensity 50%37.456
SRR6706288Light intensity 20%36.810
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.943
CNS0095593Slightly white alabastrum(diploid) 221.024
CNS0095594Slightly white alabastrum(diploid) 315.475
CNS0095595Whole white alabastrum(diploid) 215.832
CNS0095596Whole white alabastrum(diploid) 314.609
CNS0095597Whole white alabastrum(diploid) 413.286
CNS0095598Silvery flower (diploied) 131.167
CNS0095599Silvery flower (diploied) 226.279
CNS0095600Silvery flower (diploied) 359.240
CNS0095601Golden flower (diploid) 140.189
CNS0095602Golden flower (diploid) 250.544
CNS0095603Golden flower (diploid) 354.483
CNS0095604Slightly white alabastrum(tetraploid) 118.583
CNS0095605Slightly white alabastrum(tetraploid) 212.537
CNS0095606Slightly white alabastrum(tetraploid) 327.020
CNS0095607Whole white alabastrum(tetraploid) 111.875
CNS0095608Whole white alabastrum(tetraploid) 211.362
CNS0095609Whole white alabastrum(tetraploid) 322.301
CNS0095610Silvery flower (tetraploid) 163.712
CNS0095611Silvery flower (tetraploid) 262.219
CNS0095612Silvery flower (tetraploid) 375.490
CNS0095613Golden flower (tetraploid) 165.687
CNS0095614Golden flower (tetraploid) 261.010
CNS0095615Golden flower (tetraploid) 375.154
CRA001975CRR073297Stem 125.513
CRR073298Stem 230.244
CRR073299Stem 328.660
CRR073300Leaf 130.361
CRR073301Leaf 233.036
CRR073302Leaf 327.495
CRR073303Juvenile bud 130.558
CRR073304Juvenile bud 230.939
CRR073305Juvenile bud 331.629
CRR073306Third green 159.271
CRR073307Third green 240.279
CRR073308Third green 347.007
CRR073309Second white 156.029
CRR073310Second white 260.703
CRR073311Second white 343.775
CRR073312Silver flowering 143.471
CRR073313Silver flowering 242.566
CRR073314Silver flowering 326.701
CRR073315Gold flowering 168.499
CRR073316Gold flowering 271.617
CRR073317Gold flowering 356.369
CRR073318Tawny withering 122.701
CRR073319Tawny withering 231.661
CRR073320Tawny withering 319.099