Detail information of GWHGAAZE005707


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008241440.11.50411E-34PREDICTED: protein pelota homolog [Prunus mume]
Swissprottr|Q9ZT87|PEL1_ARATH4E-35Protein PELOTA 1
trEMBLtr|I3SW84|I3SW84_LOTJA4E-34Uncharacterized protein {ECO:0000313|EMBL:AFK44526.1}
TAIR10AT4G27650.19E-30Eukaryotic release factor 1 (eRF1) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1244465112444932-
GWHAAZE00000002mRNA1244465112444932-
GWHAAZE00000002exon1244465112444932-
GWHAAZE00000002CDS1244465112444932-
Transcript Sequence

Network for GWHGAAZE005707

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03465.16eRF1_32872.90E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06965PELO, DOM34, pelA mRNA surveillance pathway map03015

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.510
SRR3591706second leaf0.859
SRR3591707mature leaf2.556
SRR3591708Shoot apex3.430
SRR3591709Stem13.866
SRR3591710White floral bud14.237
SRR3591711White flower13.683
SRR3591712Green floral bud15.574
SRR3591713Yellow flower9.032
SRP173429 SRR8316895Juvenile bud stage 4.480
SRR8316896Juvenile bud stage 4.923
SRR8316897Juvenile bud stage 1.238
SRR8316894Third green stage 2.612
SRR8316900Third green stage 6.539
SRR8316901Third green stage 6.416
SRR8316898Complete white stage 2.822
SRR8316899Complete white stage 7.588
SRR8316903Complete white stage 4.560
SRR8316902Silver flowering stage2.039
SRR8316904Silver flowering stage2.429
SRR8316905Silver flowering stage1.848
SRR8316906Gold flowering stage 3.851
SRR8316907Gold flowering stage 4.341
SRR8316908Gold flowering stage 2.493
SRP132670SRR6706286Control2.982
SRR6706287Light intensity 50%2.598
SRR6706288Light intensity 20%2.569
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.487
CNS0095593Slightly white alabastrum(diploid) 27.916
CNS0095594Slightly white alabastrum(diploid) 37.004
CNS0095595Whole white alabastrum(diploid) 210.665
CNS0095596Whole white alabastrum(diploid) 37.446
CNS0095597Whole white alabastrum(diploid) 412.781
CNS0095598Silvery flower (diploied) 17.576
CNS0095599Silvery flower (diploied) 26.351
CNS0095600Silvery flower (diploied) 37.979
CNS0095601Golden flower (diploid) 15.435
CNS0095602Golden flower (diploid) 25.363
CNS0095603Golden flower (diploid) 35.159
CNS0095604Slightly white alabastrum(tetraploid) 17.008
CNS0095605Slightly white alabastrum(tetraploid) 25.361
CNS0095606Slightly white alabastrum(tetraploid) 33.131
CNS0095607Whole white alabastrum(tetraploid) 14.865
CNS0095608Whole white alabastrum(tetraploid) 27.176
CNS0095609Whole white alabastrum(tetraploid) 35.048
CNS0095610Silvery flower (tetraploid) 11.820
CNS0095611Silvery flower (tetraploid) 23.385
CNS0095612Silvery flower (tetraploid) 34.504
CNS0095613Golden flower (tetraploid) 11.890
CNS0095614Golden flower (tetraploid) 22.958
CNS0095615Golden flower (tetraploid) 30.636
CRA001975CRR073297Stem 12.421
CRR073298Stem 21.860
CRR073299Stem 33.157
CRR073300Leaf 14.332
CRR073301Leaf 24.109
CRR073302Leaf 31.602
CRR073303Juvenile bud 12.495
CRR073304Juvenile bud 22.577
CRR073305Juvenile bud 32.934
CRR073306Third green 11.326
CRR073307Third green 22.333
CRR073308Third green 33.020
CRR073309Second white 13.051
CRR073310Second white 21.118
CRR073311Second white 33.842
CRR073312Silver flowering 10.642
CRR073313Silver flowering 21.330
CRR073314Silver flowering 30.273
CRR073315Gold flowering 11.053
CRR073316Gold flowering 20.105
CRR073317Gold flowering 30.080
CRR073318Tawny withering 16.570
CRR073319Tawny withering 25.021
CRR073320Tawny withering 32.640