Detail information of GWHGAAZE005714


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011101469.11.43282E-48PREDICTED: E3 ubiquitin-protein ligase UPL7 [Sesamum indicum]
Swissprottr|Q9SCQ2|UPL7_ARATH2E-45E3 ubiquitin-protein ligase UPL7
trEMBLtr|D7TIY3|D7TIY3_VITVI6E-48Putative uncharacterized protein {ECO:0000313|EMBL:CBI30209.3}
TAIR10AT3G53090.25E-40ubiquitin-protein ligase 7

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1253786212539971-
GWHAAZE00000002mRNA1253786212539971-
GWHAAZE00000002exon1253992412539971-
GWHAAZE00000002exon1253806312538233-
GWHAAZE00000002exon1253786212537975-
GWHAAZE00000002CDS1253992412539971-
GWHAAZE00000002CDS1253806312538233-
GWHAAZE00000002CDS1253786212537975-
Transcript Sequence

Network for GWHGAAZE005714

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00632.26HECT211068.50E-21
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyHECT

KEGG pathway

KO Enzyme pathway mapID
K10588UBE3B Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName
GO:0004842molecular_functionubiquitin-protein transferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.227
SRR3591706second leaf7.768
SRR3591707mature leaf7.611
SRR3591708Shoot apex6.974
SRR3591709Stem15.638
SRR3591710White floral bud7.701
SRR3591711White flower12.175
SRR3591712Green floral bud9.367
SRR3591713Yellow flower13.481
SRP173429 SRR8316895Juvenile bud stage 4.967
SRR8316896Juvenile bud stage 6.358
SRR8316897Juvenile bud stage 2.157
SRR8316894Third green stage 2.178
SRR8316900Third green stage 5.542
SRR8316901Third green stage 6.106
SRR8316898Complete white stage 3.264
SRR8316899Complete white stage 6.732
SRR8316903Complete white stage 9.175
SRR8316902Silver flowering stage3.826
SRR8316904Silver flowering stage3.886
SRR8316905Silver flowering stage1.497
SRR8316906Gold flowering stage 6.402
SRR8316907Gold flowering stage 7.569
SRR8316908Gold flowering stage 7.972
SRP132670SRR6706286Control1.079
SRR6706287Light intensity 50%1.558
SRR6706288Light intensity 20%1.988
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.956
CNS0095593Slightly white alabastrum(diploid) 23.188
CNS0095594Slightly white alabastrum(diploid) 36.534
CNS0095595Whole white alabastrum(diploid) 25.787
CNS0095596Whole white alabastrum(diploid) 33.684
CNS0095597Whole white alabastrum(diploid) 49.385
CNS0095598Silvery flower (diploied) 16.830
CNS0095599Silvery flower (diploied) 28.597
CNS0095600Silvery flower (diploied) 34.587
CNS0095601Golden flower (diploid) 19.246
CNS0095602Golden flower (diploid) 25.210
CNS0095603Golden flower (diploid) 35.233
CNS0095604Slightly white alabastrum(tetraploid) 17.597
CNS0095605Slightly white alabastrum(tetraploid) 25.753
CNS0095606Slightly white alabastrum(tetraploid) 310.483
CNS0095607Whole white alabastrum(tetraploid) 14.245
CNS0095608Whole white alabastrum(tetraploid) 24.609
CNS0095609Whole white alabastrum(tetraploid) 38.168
CNS0095610Silvery flower (tetraploid) 16.977
CNS0095611Silvery flower (tetraploid) 24.136
CNS0095612Silvery flower (tetraploid) 38.130
CNS0095613Golden flower (tetraploid) 14.097
CNS0095614Golden flower (tetraploid) 25.928
CNS0095615Golden flower (tetraploid) 35.461
CRA001975CRR073297Stem 12.180
CRR073298Stem 22.143
CRR073299Stem 32.967
CRR073300Leaf 13.268
CRR073301Leaf 21.486
CRR073302Leaf 30.376
CRR073303Juvenile bud 10.878
CRR073304Juvenile bud 20.994
CRR073305Juvenile bud 32.397
CRR073306Third green 11.402
CRR073307Third green 20.060
CRR073308Third green 30.100
CRR073309Second white 10.349
CRR073310Second white 21.039
CRR073311Second white 32.661
CRR073312Silver flowering 10.999
CRR073313Silver flowering 20.372
CRR073314Silver flowering 30.758
CRR073315Gold flowering 10.297
CRR073316Gold flowering 20.569
CRR073317Gold flowering 31.360
CRR073318Tawny withering 12.722
CRR073319Tawny withering 22.229
CRR073320Tawny withering 31.787