Detail information of GWHGAAZE005722


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP15340.10unnamed protein product [Coffea canephora]
Swissprottr|Q42806|KPYC_SOYBN5E-123Pyruvate kinase, cytosolic isozyme
trEMBLtr|A0A068V3H1|A0A068V3H1_COFCA0Pyruvate kinase {ECO:0000256|RuleBase:RU000504}
TAIR10AT3G52990.10Pyruvate kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1266535612671723-
GWHAAZE00000002mRNA1266535612671723-
GWHAAZE00000002exon1266535612665508-
GWHAAZE00000002exon1266600012666059-
GWHAAZE00000002exon1266635112666450-
GWHAAZE00000002exon1266653012666597-
GWHAAZE00000002exon1266673112666826-
GWHAAZE00000002exon1266696112667049-
GWHAAZE00000002exon1266715612667300-
GWHAAZE00000002exon1266818812668277-
GWHAAZE00000002exon1266838512668456-
GWHAAZE00000002exon1266862012668700-
GWHAAZE00000002exon1266879912668930-
GWHAAZE00000002exon1266923912669315-
GWHAAZE00000002exon1266988712669989-
GWHAAZE00000002exon1267111712671214-
GWHAAZE00000002exon1267142512671521-
GWHAAZE00000002exon1267165512671723-
GWHAAZE00000002CDS1267165512671723-
GWHAAZE00000002CDS1267142512671521-
GWHAAZE00000002CDS1267111712671214-
GWHAAZE00000002CDS1266988712669989-
GWHAAZE00000002CDS1266923912669315-
GWHAAZE00000002CDS1266879912668930-
GWHAAZE00000002CDS1266862012668700-
GWHAAZE00000002CDS1266838512668456-
GWHAAZE00000002CDS1266818812668277-
GWHAAZE00000002CDS1266715612667300-
GWHAAZE00000002CDS1266696112667049-
GWHAAZE00000002CDS1266673112666826-
GWHAAZE00000002CDS1266653012666597-
GWHAAZE00000002CDS1266635112666450-
GWHAAZE00000002CDS1266600012666059-
GWHAAZE00000002CDS1266535612665508-
Transcript Sequence

Network for GWHGAAZE005722

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00224.22PK303596.70E-84
PF02887.17PK_C3775043.60E-23
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00873PK, pyk Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0003824molecular_functioncatalytic activity
GO:0000287molecular_functionmagnesium ion binding
GO:0004743molecular_functionpyruvate kinase activity
GO:0030955molecular_functionpotassium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf34.777
SRR3591706second leaf21.550
SRR3591707mature leaf18.850
SRR3591708Shoot apex22.721
SRR3591709Stem32.123
SRR3591710White floral bud102.967
SRR3591711White flower109.150
SRR3591712Green floral bud72.342
SRR3591713Yellow flower103.040
SRP173429 SRR8316895Juvenile bud stage 34.316
SRR8316896Juvenile bud stage 65.578
SRR8316897Juvenile bud stage 34.317
SRR8316894Third green stage 28.077
SRR8316900Third green stage 81.742
SRR8316901Third green stage 69.337
SRR8316898Complete white stage 63.011
SRR8316899Complete white stage 61.668
SRR8316903Complete white stage 88.697
SRR8316902Silver flowering stage55.729
SRR8316904Silver flowering stage82.069
SRR8316905Silver flowering stage43.170
SRR8316906Gold flowering stage 157.022
SRR8316907Gold flowering stage 160.474
SRR8316908Gold flowering stage 156.730
SRP132670SRR6706286Control36.313
SRR6706287Light intensity 50%40.237
SRR6706288Light intensity 20%43.743
CNP0000432CNS0095592Slightly white alabastrum(diploid) 138.266
CNS0095593Slightly white alabastrum(diploid) 244.028
CNS0095594Slightly white alabastrum(diploid) 343.250
CNS0095595Whole white alabastrum(diploid) 245.364
CNS0095596Whole white alabastrum(diploid) 352.649
CNS0095597Whole white alabastrum(diploid) 438.747
CNS0095598Silvery flower (diploied) 139.043
CNS0095599Silvery flower (diploied) 238.142
CNS0095600Silvery flower (diploied) 378.489
CNS0095601Golden flower (diploid) 125.217
CNS0095602Golden flower (diploid) 259.481
CNS0095603Golden flower (diploid) 352.945
CNS0095604Slightly white alabastrum(tetraploid) 160.399
CNS0095605Slightly white alabastrum(tetraploid) 248.800
CNS0095606Slightly white alabastrum(tetraploid) 339.225
CNS0095607Whole white alabastrum(tetraploid) 146.117
CNS0095608Whole white alabastrum(tetraploid) 246.301
CNS0095609Whole white alabastrum(tetraploid) 366.005
CNS0095610Silvery flower (tetraploid) 158.556
CNS0095611Silvery flower (tetraploid) 257.291
CNS0095612Silvery flower (tetraploid) 398.719
CNS0095613Golden flower (tetraploid) 144.745
CNS0095614Golden flower (tetraploid) 248.540
CNS0095615Golden flower (tetraploid) 379.767
CRA001975CRR073297Stem 137.966
CRR073298Stem 236.208
CRR073299Stem 334.746
CRR073300Leaf 144.942
CRR073301Leaf 249.052
CRR073302Leaf 350.247
CRR073303Juvenile bud 162.248
CRR073304Juvenile bud 270.167
CRR073305Juvenile bud 355.477
CRR073306Third green 187.799
CRR073307Third green 2105.211
CRR073308Third green 385.767
CRR073309Second white 1101.190
CRR073310Second white 2104.041
CRR073311Second white 386.996
CRR073312Silver flowering 164.178
CRR073313Silver flowering 266.461
CRR073314Silver flowering 366.998
CRR073315Gold flowering 132.056
CRR073316Gold flowering 235.399
CRR073317Gold flowering 325.986
CRR073318Tawny withering 147.818
CRR073319Tawny withering 234.727
CRR073320Tawny withering 339.507