Gene detail

Detail information of GWHGAAZE005726

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AHX24367.1	0	CYP76A26-like protein [Rauvolfia serpentina]
Swissprot	tr\|P37122\|C76A2_SOLME	2E-149	Cytochrome P450 76A2
trEMBL	tr\|A0A023PKA8\|A0A023PKA8_RAUSE	0	CYP76A26-like protein {ECO:0000313\|EMBL:AHX24367.1}
TAIR10	AT3G52970.1	2E-87	cytochrome P450, family 76, subfamily G, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	12730906	12732503	+
GWHAAZE00000002	mRNA	12730906	12732503	+
GWHAAZE00000002	exon	12730906	12731505	+
GWHAAZE00000002	exon	12731883	12732503	+
GWHAAZE00000002	CDS	12730906	12731505	+
GWHAAZE00000002	CDS	12731883	12732503	+

Transcript Sequence
>GWHTAAZE005734 ATGAAATATGATTTCCAACACAGGTTCAATGACGGATCTCTCGGCCAGGCCAGGTTCGGTGCAGATTGGCGCGTGCTGAGGAGGCTCTGCTCGTCAGAGTTCATGGTGAACAAACGGCTGAATGACACCACCGACATCCGGCGCCGGCTTGAGGACAATCTGGTTCGTTGGATAGATGACGAGGCGCGCAGCAGCTCCGGCGAAGTGGAGGTTGGGAGATTCTTCTTCCTAGTGGCGTTCAATTTGATAGGGAACCTCTTGCTGTCGAGGGATCTGATGGATGCGAAGGATCCGGAGAGCAAAGAGTTCTTCAAGTGTATGAATAAGATTGTGGAATTGGCAGGCACGCCTAATGTGGCTGATTTTTTGCCATGGTTAAAATGGCTGGATCCGTCTGGTGTGAGGAGGGGAATTCATTCGAGTATGGTGAAGACAATGAAGGTGACGACGAGATTCGTGCAAGAGAGACTGGAGCAGAGGAAATCTAAGGATGATCATAAGAGGAAGAAGGATTTCTTGGATACGTTGTTGGAGTATGAAGGAGATGGTAAGGGTGGACCTGAAAGAATGACCCTTCACAATGCCCAAATCCTCATCATGGAGATGTTTTTTGCTGGATCAGAAACTACAAGCATAAGCATCGAATGGGGTTTCGTTGAGATGCTTCGCAACCCGCATGTAATGCAAAAGGTTAGAAATGAGATTGACACAGTGATAGGTCTACACAGGAAGGTTGAAGAGAGCGACTTTGAAAGACTACCATATCTCCAAGCTGTGGTGAAGGAAACACTGCGTTTACATCCAGTACTTCCTCTACTCCTACCAAGGAATACGACGGAGGATACCAAGTACATGGGGTATTTCGTACCCAAAGATACTCAGGTGTTTGTGAATGCTTGGGCAATTGGAAGGGATCCAGCCGCTTGGGATGATCCCTTAACTTTCAAGCCTGAGAGGTTTCTAGGTTCAGATATCGAATACAAGGGGCAAGATTTTCAGTTAATTCCATTTGGATCTGGGAGGAGAATTTGCGTGGGTTTTCCCTTGGCACACAGAGTAGTTCACTTAACTCTCGCGACCATAATTCAGAATTTCGATTGGGAGTTACCTGCCGGTGTCACTCCAAAATCAATTGACATGGAGGAGAAATTTGGCTTGACCCTGCGGAAGAAAATACCAATGAAGGCAGTGCCTAGAAAGCGAAGTAACTTGAAATTTTAA

Network for GWHGAAZE005726

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0264

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	20	387	5.30E-100

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K20618	CYP76A26	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Monoterpenoid biosynthesis	map00902

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	190.910
	SRR3591706	second leaf	663.457
	SRR3591707	mature leaf	218.216
	SRR3591708	Shoot apex	625.193
	SRR3591709	Stem	18.593
	SRR3591710	White floral bud	33.236
	SRR3591711	White flower	44.806
	SRR3591712	Green floral bud	108.772
	SRR3591713	Yellow flower	6.476
SRP173429	SRR8316895	Juvenile bud stage	284.713
	SRR8316896	Juvenile bud stage	187.447
	SRR8316897	Juvenile bud stage	97.913
	SRR8316894	Third green stage	49.542
	SRR8316900	Third green stage	112.531
	SRR8316901	Third green stage	89.951
	SRR8316898	Complete white stage	30.586
	SRR8316899	Complete white stage	154.654
	SRR8316903	Complete white stage	47.635
	SRR8316902	Silver flowering stage	7.857
	SRR8316904	Silver flowering stage	14.993
	SRR8316905	Silver flowering stage	6.581
	SRR8316906	Gold flowering stage	4.813
	SRR8316907	Gold flowering stage	9.816
	SRR8316908	Gold flowering stage	26.028
SRP132670	SRR6706286	Control	115.514
	SRR6706287	Light intensity 50%	113.204
	SRR6706288	Light intensity 20%	97.203
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	387.692
	CNS0095593	Slightly white alabastrum(diploid) 2	373.409
	CNS0095594	Slightly white alabastrum(diploid) 3	393.346
	CNS0095595	Whole white alabastrum(diploid) 2	558.622
	CNS0095596	Whole white alabastrum(diploid) 3	55.374
	CNS0095597	Whole white alabastrum(diploid) 4	334.903
	CNS0095598	Silvery flower (diploied) 1	262.448
	CNS0095599	Silvery flower (diploied) 2	272.997
	CNS0095600	Silvery flower (diploied) 3	57.015
	CNS0095601	Golden flower (diploid) 1	216.857
	CNS0095602	Golden flower (diploid) 2	110.125
	CNS0095603	Golden flower (diploid) 3	111.689
	CNS0095604	Slightly white alabastrum(tetraploid) 1	219.640
	CNS0095605	Slightly white alabastrum(tetraploid) 2	333.695
	CNS0095606	Slightly white alabastrum(tetraploid) 3	839.404
	CNS0095607	Whole white alabastrum(tetraploid) 1	177.460
	CNS0095608	Whole white alabastrum(tetraploid) 2	47.845
	CNS0095609	Whole white alabastrum(tetraploid) 3	90.361
	CNS0095610	Silvery flower (tetraploid) 1	34.270
	CNS0095611	Silvery flower (tetraploid) 2	61.827
	CNS0095612	Silvery flower (tetraploid) 3	12.520
	CNS0095613	Golden flower (tetraploid) 1	17.630
	CNS0095614	Golden flower (tetraploid) 2	63.484
	CNS0095615	Golden flower (tetraploid) 3	10.269
CRA001975	CRR073297	Stem 1	274.786
	CRR073298	Stem 2	291.487
	CRR073299	Stem 3	425.210
	CRR073300	Leaf 1	81.468
	CRR073301	Leaf 2	78.535
	CRR073302	Leaf 3	95.342
	CRR073303	Juvenile bud 1	119.860
	CRR073304	Juvenile bud 2	45.707
	CRR073305	Juvenile bud 3	128.613
	CRR073306	Third green 1	7.646
	CRR073307	Third green 2	17.482
	CRR073308	Third green 3	16.886
	CRR073309	Second white 1	1.357
	CRR073310	Second white 2	2.462
	CRR073311	Second white 3	0.358
	CRR073312	Silver flowering 1	0.139
	CRR073313	Silver flowering 2	0.589
	CRR073314	Silver flowering 3	0.515
	CRR073315	Gold flowering 1	130.160
	CRR073316	Gold flowering 2	128.670
	CRR073317	Gold flowering 3	310.954
	CRR073318	Tawny withering 1	740.635
	CRR073319	Tawny withering 2	370.874
	CRR073320	Tawny withering 3	1102.496