Gene detail

Detail information of GWHGAAZE005727

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AHX24364.1	0	CYP76A26-like protein [Lonicera japonica]
Swissprot	tr\|P37122\|C76A2_SOLME	0	Cytochrome P450 76A2
trEMBL	tr\|A0A023PJX3\|A0A023PJX3_LONJA	0	CYP76A26-like protein {ECO:0000313\|EMBL:AHX24364.1}
TAIR10	AT3G52970.1	7E-110	cytochrome P450, family 76, subfamily G, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	12747964	12749801	+
GWHAAZE00000002	mRNA	12747964	12749801	+
GWHAAZE00000002	exon	12747964	12748731	+
GWHAAZE00000002	exon	12749184	12749801	+
GWHAAZE00000002	CDS	12747964	12748731	+
GWHAAZE00000002	CDS	12749184	12749801	+

Transcript Sequence
>GWHTAAZE005735 ATGTTCGAGCTAGGCGACCTTCCACACCAGACCATGTACAAGCTCAGGAGCAAGTATGGTCCCCTTGTTTGGCTGCGGCTTGGTTCAATTCACACCCTGGTTGTACAGTCACCTGCTGCAGCTGCCGAGCTTTTCAAGAAACACGACGTTGCTTTCTCTGACCGGAAAGTACCAGATGCGCTAACCGCCTTCAACTTCAACGCAGGATCTTTGGGCATGAACGCCTACGGTGGCCACTGGCGGGTACTGAGGCGGCTCTGCTCCATGGAGTTCCTTGTAAACAAAAGAATGACTGACACTACGGCTCTCAGGCGTAGGATCATGGATAACATGGTCCATTGGATTGAGGAGGAATCACAGGGAGGGACCAGAGAGGTGCAGCTCAGCAGATTCCTATTTCTCATCGCTTTCAACTTAGTTGGTAACCTTATGTTGTCAAGGGACTTGTTGAATGCTGGGGACCCAGAGGGGAGGGAGTTTTTTGATTCGATGAATAAAGTGTTGGAGTTGGCTGGTACCCCTAACATTGCTGATTTTTTGCCGTTCTTGAAATGGTTGGACCCATTGGGGATCAAAAAGAGGATGGTGGAGGATATGGGGAAAGCGATGAAAATATCGTCCAGGTTTGTGCAGGAGAGGCTTCAAGAGAGGAAATCAGGCAAAGTGAATGACACCAAAGACTTTCTGGATACGTTGTTGGAGTATAAAGGCGATGGTAAAGATGGTCCTGATGAAATTACTGAGAAGAATGTGAACATTGTCATTCTGGAGATGTTTTTTGCCGGATCAGAAACCACAAGCATCAGCATTGAATGGGGTTTTGCTGAGCTGCTACGAAACCCTGCCGCACTGAAAAACGTTAGGGAAGAGATCGATCGCGTGGTTGGACGAGAAAGGAAAGTTGAGGAGAGCGACATGGACAATCTACCATACCTGCAAGCTGTGGTGAAGGAAACACTGCGCTTACATCCTGCACTTCCTTTACTCCTTCCACGAAACACGATGCAAGAAACTAATTACATGGGCTATCTCATTCCCAAAGACACGCAAGTCTTTGTCAATGCCTGGGCAATCGGGCGGGACCCGGATTCTTGGGAGGATCCGTTGACTTTCAAGCCTGAGAGATTTCTAACCTCGAATATCGAGTACAAAGGGCAGCATTTTGAGTTCATTCCGTTTGGATCTGGGAGAAGAATCTGCATAGGGTTTCCATTGGCTCACCGGGTGGTTCACCTAGCACTGGCGACCCTAGTACAGTCTTTTGACTGGGAGTTCCCTGCTGGTGAGGGTCCAAAGACTCTGGATATGGATGAGAGGCTGGGCTTAACGCTTAGAAAGAAGAATCCGGTTAAAGCAATACCCAAAAAAAGACTCATTGTGAAGTGA

Network for GWHGAAZE005727

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	5	447	3.20E-109

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K20618	CYP76A26	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Monoterpenoid biosynthesis	map00902

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	40.103
	SRR3591706	second leaf	39.723
	SRR3591707	mature leaf	66.777
	SRR3591708	Shoot apex	53.051
	SRR3591709	Stem	37.863
	SRR3591710	White floral bud	18.219
	SRR3591711	White flower	21.030
	SRR3591712	Green floral bud	29.016
	SRR3591713	Yellow flower	3.781
SRP173429	SRR8316895	Juvenile bud stage	31.501
	SRR8316896	Juvenile bud stage	32.609
	SRR8316897	Juvenile bud stage	15.551
	SRR8316894	Third green stage	15.048
	SRR8316900	Third green stage	53.216
	SRR8316901	Third green stage	40.515
	SRR8316898	Complete white stage	10.353
	SRR8316899	Complete white stage	71.752
	SRR8316903	Complete white stage	16.725
	SRR8316902	Silver flowering stage	3.515
	SRR8316904	Silver flowering stage	4.577
	SRR8316905	Silver flowering stage	2.565
	SRR8316906	Gold flowering stage	3.950
	SRR8316907	Gold flowering stage	5.249
	SRR8316908	Gold flowering stage	6.560
SRP132670	SRR6706286	Control	85.934
	SRR6706287	Light intensity 50%	82.179
	SRR6706288	Light intensity 20%	91.654
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	35.251
	CNS0095593	Slightly white alabastrum(diploid) 2	41.915
	CNS0095594	Slightly white alabastrum(diploid) 3	31.503
	CNS0095595	Whole white alabastrum(diploid) 2	34.149
	CNS0095596	Whole white alabastrum(diploid) 3	30.571
	CNS0095597	Whole white alabastrum(diploid) 4	30.583
	CNS0095598	Silvery flower (diploied) 1	82.145
	CNS0095599	Silvery flower (diploied) 2	89.286
	CNS0095600	Silvery flower (diploied) 3	35.055
	CNS0095601	Golden flower (diploid) 1	80.049
	CNS0095602	Golden flower (diploid) 2	57.781
	CNS0095603	Golden flower (diploid) 3	52.727
	CNS0095604	Slightly white alabastrum(tetraploid) 1	58.533
	CNS0095605	Slightly white alabastrum(tetraploid) 2	42.131
	CNS0095606	Slightly white alabastrum(tetraploid) 3	103.712
	CNS0095607	Whole white alabastrum(tetraploid) 1	35.879
	CNS0095608	Whole white alabastrum(tetraploid) 2	26.459
	CNS0095609	Whole white alabastrum(tetraploid) 3	67.507
	CNS0095610	Silvery flower (tetraploid) 1	41.004
	CNS0095611	Silvery flower (tetraploid) 2	56.267
	CNS0095612	Silvery flower (tetraploid) 3	12.762
	CNS0095613	Golden flower (tetraploid) 1	13.181
	CNS0095614	Golden flower (tetraploid) 2	40.839
	CNS0095615	Golden flower (tetraploid) 3	6.074
CRA001975	CRR073297	Stem 1	41.785
	CRR073298	Stem 2	40.769
	CRR073299	Stem 3	55.165
	CRR073300	Leaf 1	39.647
	CRR073301	Leaf 2	44.075
	CRR073302	Leaf 3	54.066
	CRR073303	Juvenile bud 1	53.208
	CRR073304	Juvenile bud 2	26.451
	CRR073305	Juvenile bud 3	62.197
	CRR073306	Third green 1	7.313
	CRR073307	Third green 2	9.832
	CRR073308	Third green 3	5.853
	CRR073309	Second white 1	3.810
	CRR073310	Second white 2	1.575
	CRR073311	Second white 3	1.018
	CRR073312	Silver flowering 1	0.316
	CRR073313	Silver flowering 2	0.349
	CRR073314	Silver flowering 3	1.383
	CRR073315	Gold flowering 1	57.262
	CRR073316	Gold flowering 2	62.909
	CRR073317	Gold flowering 3	82.183
	CRR073318	Tawny withering 1	71.993
	CRR073319	Tawny withering 2	40.271
	CRR073320	Tawny withering 3	46.062