Gene detail

Detail information of GWHGAAZE005742

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011094409.1	0	PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme [Sesamum indicum]
Swissprot	tr\|P17784\|ALF_ORYSJ	0	Fructose-bisphosphate aldolase cytoplasmic isozyme
trEMBL	tr\|A0A067F4J3\|A0A067F4J3_CITSI	0	Fructose-bisphosphate aldolase {ECO:0000256\|RuleBase:RU003994}
TAIR10	AT2G36460.1	1E-170	Aldolase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	12991548	12992695	+
GWHAAZE00000002	mRNA	12991548	12992695	+
GWHAAZE00000002	exon	12991548	12991779	+
GWHAAZE00000002	exon	12991875	12992695	+
GWHAAZE00000002	CDS	12991548	12991779	+
GWHAAZE00000002	CDS	12991875	12992695	+

Transcript Sequence
>GWHTAAZE005750 GCAGATGAGCTCATCAAGAATGCTACCTATATTGGCACACCTGGGAAAGGTATCCTTGCCGCTGATGAGTCTACTGGCACAATCGGCAAGCGTCTTTCCAGCATCAACGTTGAGAATAATGAGACAAACAGGAGGGCATTGAGGGAGCTTCTTTTCTGCACTCCCGGTGCCCTTCAATACCTCAGTGGTGTAATTCTCTTTGAGGAAACTCTCTACCAAAAGACTGCTGCAGGTAAGCCATTTGTGGAGGTCCTCAAGGAAGGTGGAGTCCTCCCGGGAATCAAGGTGGACAAGGGCACCGTTGAGCTAGCTGGTACAAATGGTGAGACCACCACCCAAGGTCTCGACGGTCTTGCCCAGCGTTGCCAGCAGTATTATGCTGCTGGCGCTCGATTCGCCAAGTGGCGTGCAGTCCTCAAGATTGGCCCCACCGAGCCATCCCAGCTGGCCATCAATGAGAACGCCAACGGTTTGGCCCGATATGCCATCATCTGCCAGGAGAACGGCCTGGTCCCCATTGTCGAGCCTGAGATTCTAGTAGACGGACCCCACGACATCAACAAGTGCGCTGACGTGACTGAGCGTGTTCTTGCTGCGTGCTACAAGGCGCTAAATGACCACAAAGTCCTCCTCGAGGGGACCTTATTGAAACCCAACATGGTGACCCCTGGTTCGGACGCCAAGAAGGTTGCACCCAAGGTGGTGGCCGAGTACACAGTTCAGGCCCTCCAGCGGACCATGCCGCCTGCAGTACCAGCCGTGGTGTTTTTGTCGGGTGGGCAGAGTGAGGAGGAGGCTACTGTTAACCTCAATGCCATGAACCAGCTCAAGACAAAGAAGCCATGGAGCCTCTCGTTCTCGTTCGGGCGTGCTCTTCAGCAGAGTACTCTCAAGGCTTGGGCAGGGAAGGAAGAAAATGTGAAGAAGGCTCAAGAGGCATTCCTTGCTAGGTGCAAGGCCAACTCTGAGGCTACCCTTGGGACTTACAAGGGCGGTGCTGCTTTGAGCGAAGGAGCTGCTGAGAGCCTTCACGTCAAGGACTACAAGTATTAG

Network for GWHGAAZE005742

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0160

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00274.20	Glycolytic	3	350	3.20E-173

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01623	ALDO	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Biosynthesis of amino acids	map01230
		Glycolysis / Gluconeogenesis	map00010
		Pentose phosphate pathway	map00030
		Fructose and mannose metabolism	map00051
		Carbon fixation in photosynthetic organisms	map00710
		Methane metabolism	map00680
		HIF-1 signaling pathway	map04066

Gene Ontology

GO term	Ontology	Name
GO:0006096	biological_process	glycolytic process
GO:0004332	molecular_function	fructose-bisphosphate aldolase activity
GO:0003824	molecular_function	catalytic activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	340.707
	SRR3591706	second leaf	99.162
	SRR3591707	mature leaf	76.786
	SRR3591708	Shoot apex	198.737
	SRR3591709	Stem	302.013
	SRR3591710	White floral bud	541.557
	SRR3591711	White flower	621.608
	SRR3591712	Green floral bud	580.038
	SRR3591713	Yellow flower	412.960
SRP173429	SRR8316895	Juvenile bud stage	186.993
	SRR8316896	Juvenile bud stage	227.222
	SRR8316897	Juvenile bud stage	132.387
	SRR8316894	Third green stage	116.151
	SRR8316900	Third green stage	549.800
	SRR8316901	Third green stage	489.598
	SRR8316898	Complete white stage	263.795
	SRR8316899	Complete white stage	465.595
	SRR8316903	Complete white stage	278.572
	SRR8316902	Silver flowering stage	306.577
	SRR8316904	Silver flowering stage	351.066
	SRR8316905	Silver flowering stage	184.572
	SRR8316906	Gold flowering stage	606.884
	SRR8316907	Gold flowering stage	832.700
	SRR8316908	Gold flowering stage	791.850
SRP132670	SRR6706286	Control	404.201
	SRR6706287	Light intensity 50%	409.036
	SRR6706288	Light intensity 20%	435.320
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	284.722
	CNS0095593	Slightly white alabastrum(diploid) 2	344.140
	CNS0095594	Slightly white alabastrum(diploid) 3	265.739
	CNS0095595	Whole white alabastrum(diploid) 2	335.601
	CNS0095596	Whole white alabastrum(diploid) 3	381.027
	CNS0095597	Whole white alabastrum(diploid) 4	314.556
	CNS0095598	Silvery flower (diploied) 1	359.496
	CNS0095599	Silvery flower (diploied) 2	389.826
	CNS0095600	Silvery flower (diploied) 3	598.996
	CNS0095601	Golden flower (diploid) 1	340.567
	CNS0095602	Golden flower (diploid) 2	516.525
	CNS0095603	Golden flower (diploid) 3	494.639
	CNS0095604	Slightly white alabastrum(tetraploid) 1	402.715
	CNS0095605	Slightly white alabastrum(tetraploid) 2	375.243
	CNS0095606	Slightly white alabastrum(tetraploid) 3	452.515
	CNS0095607	Whole white alabastrum(tetraploid) 1	398.694
	CNS0095608	Whole white alabastrum(tetraploid) 2	413.270
	CNS0095609	Whole white alabastrum(tetraploid) 3	546.650
	CNS0095610	Silvery flower (tetraploid) 1	573.995
	CNS0095611	Silvery flower (tetraploid) 2	657.245
	CNS0095612	Silvery flower (tetraploid) 3	679.600
	CNS0095613	Golden flower (tetraploid) 1	357.526
	CNS0095614	Golden flower (tetraploid) 2	512.024
	CNS0095615	Golden flower (tetraploid) 3	327.570
CRA001975	CRR073297	Stem 1	392.635
	CRR073298	Stem 2	394.917
	CRR073299	Stem 3	650.770
	CRR073300	Leaf 1	556.827
	CRR073301	Leaf 2	594.920
	CRR073302	Leaf 3	1007.780
	CRR073303	Juvenile bud 1	963.389
	CRR073304	Juvenile bud 2	1067.871
	CRR073305	Juvenile bud 3	1121.015
	CRR073306	Third green 1	982.077
	CRR073307	Third green 2	1033.642
	CRR073308	Third green 3	835.638
	CRR073309	Second white 1	2164.676
	CRR073310	Second white 2	1001.138
	CRR073311	Second white 3	751.039
	CRR073312	Silver flowering 1	972.257
	CRR073313	Silver flowering 2	1560.592
	CRR073314	Silver flowering 3	1058.398
	CRR073315	Gold flowering 1	199.429
	CRR073316	Gold flowering 2	178.274
	CRR073317	Gold flowering 3	273.990
	CRR073318	Tawny withering 1	696.305
	CRR073319	Tawny withering 2	445.056
	CRR073320	Tawny withering 3	923.405