Gene detail

Detail information of GWHGAAZE005759

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002277129.2	0	PREDICTED: cytochrome P450 94C1 [Vitis vinifera]
Swissprot	tr\|Q9ZUX1\|C94C1_ARATH	3E-165	Cytochrome P450 94C1
trEMBL	tr\|F6HKJ2\|F6HKJ2_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB55414.1}
TAIR10	AT2G27690.1	9E-135	cytochrome P450, family 94, subfamily C, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	13361967	13363184	-
GWHAAZE00000002	mRNA	13361967	13363184	-
GWHAAZE00000002	exon	13362294	13363184	-
GWHAAZE00000002	exon	13361967	13362257	-
GWHAAZE00000002	CDS	13362294	13363184	-
GWHAAZE00000002	CDS	13361967	13362257	-

Transcript Sequence
>GWHTAAZE005767 ATGCTTAAAACAAGGTTTGATAACTTTCCTAAAGGAAAGCCTTTTTCAACCATCCTCGGGGACCTTTTAGGGAAGGGTATCTTTAATGTCGATGGGGATTTATGGAAGTTTCAAAGGAAAATGGCTAGTCTTGAGCTCGGGAAAGTCTCTATTAGATCTTTCGCTTATGATGTTGTTAATTTTGAAATCCAAGACCGCCTTATACCTCTTTTATCCTCAGTTGCAGATAAGGAAGACGCGGTTTTGGATTTGCAAGATGTTTTTCGACGTTTTTCATTTGATAGTATATGTAGATTTTCATTCGGGTTGGACCCAAAGTGCTTAGAGAAGTCCCTTCCTATTTCCGAATTCGCTATAGCATTCGACTTAGCCTCGAAGCTCTCAGCCGAACGGGCAATGACTGCATCACCGTTGATTTGGAAGATCAAGAGGCTCTTCAATATTGGGAGTGAGAAGAAACTAAAACAAGCGATTAAAATGATCAACGTTTTAGCCCAAGAAGTGATACGACAAAGGCAAAAAATAGGGTTTTCTAACCATAAAGATTTGTTATCGCGGTTTATGGGCACAACAAATGATGCAAAGTACCTTAGAGATATTGTCATAAGCTTCCTTTTAGCCGGGCGAGATACAGTTGCCTCGGCTTTAACAAGTTTGTTTTTAATGTTGGCTAAGCACCCACACGTAGAGGAAGCTATCCTGGCCGAGGCTAATCGAGTTCTCAGCCCAAACAAGGAGGTCACAAACTTTGAACAAATGCGGGAACTCCATTACTTACAAGCATCGGTGTACGAGAGTATGAGACTTTACCCTCCAATACAATTTGATTCAAAGTTTTGTTTACAAGACGATGTATTGGCCGATGATACTTTTGTGAAGAGAGGGACTAGGGGGATTTGGGGCCCAGATTGCTTGGAGTTCAAGCCAGAGAGATGGTTAAAAGATGGGGTTTTCTTTCAAGAAAGTAACCCATTTAAGTACCCGGTCTTTCAAGCCGGAGTTAGGGTATGTTTGGGCAAAGAAATGGCACTTGTGGAGCTCAAAAGCATAGCGCTTTCCTTGCTACAACGGTTCCATATCCGATTAGCCAAACCAGGTCACACTCCCCGATTCAGTCCAGGGCTCACCGCTACTTTTAGCGATGGCCTATCGGTTTTGGTTCGCAAAAGGGCAAAGTCGTAG

Network for GWHGAAZE005759

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	6	369	2.70E-48

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.728
	SRR3591706	second leaf	1.546
	SRR3591707	mature leaf	1.946
	SRR3591708	Shoot apex	0.580
	SRR3591709	Stem	1.274
	SRR3591710	White floral bud	2.946
	SRR3591711	White flower	0.747
	SRR3591712	Green floral bud	0.040
	SRR3591713	Yellow flower	0.373
SRP173429	SRR8316895	Juvenile bud stage	0.170
	SRR8316896	Juvenile bud stage	0.193
	SRR8316897	Juvenile bud stage	0.090
	SRR8316894	Third green stage	0.057
	SRR8316900	Third green stage	0.070
	SRR8316901	Third green stage	0.346
	SRR8316898	Complete white stage	7.579
	SRR8316899	Complete white stage	2.430
	SRR8316903	Complete white stage	14.156
	SRR8316902	Silver flowering stage	2.123
	SRR8316904	Silver flowering stage	2.336
	SRR8316905	Silver flowering stage	1.224
	SRR8316906	Gold flowering stage	3.009
	SRR8316907	Gold flowering stage	2.626
	SRR8316908	Gold flowering stage	1.444
SRP132670	SRR6706286	Control	0.421
	SRR6706287	Light intensity 50%	0.634
	SRR6706288	Light intensity 20%	0.117
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.151
	CNS0095593	Slightly white alabastrum(diploid) 2	0.252
	CNS0095594	Slightly white alabastrum(diploid) 3	0.407
	CNS0095595	Whole white alabastrum(diploid) 2	0.124
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.067
	CNS0095598	Silvery flower (diploied) 1	0.564
	CNS0095599	Silvery flower (diploied) 2	0.209
	CNS0095600	Silvery flower (diploied) 3	1.158
	CNS0095601	Golden flower (diploid) 1	0.159
	CNS0095602	Golden flower (diploid) 2	0.406
	CNS0095603	Golden flower (diploid) 3	0.948
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.114
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.112
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.163
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.054
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.227
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.101
	CNS0095610	Silvery flower (tetraploid) 1	1.666
	CNS0095611	Silvery flower (tetraploid) 2	1.254
	CNS0095612	Silvery flower (tetraploid) 3	6.066
	CNS0095613	Golden flower (tetraploid) 1	0.204
	CNS0095614	Golden flower (tetraploid) 2	0.200
	CNS0095615	Golden flower (tetraploid) 3	0.803
CRA001975	CRR073297	Stem 1	0.887
	CRR073298	Stem 2	0.480
	CRR073299	Stem 3	0.588
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.278
	CRR073302	Leaf 3	0.249
	CRR073303	Juvenile bud 1	0.318
	CRR073304	Juvenile bud 2	1.328
	CRR073305	Juvenile bud 3	0.850
	CRR073306	Third green 1	16.348
	CRR073307	Third green 2	7.931
	CRR073308	Third green 3	10.411
	CRR073309	Second white 1	2.651
	CRR073310	Second white 2	1.716
	CRR073311	Second white 3	1.325
	CRR073312	Silver flowering 1	0.184
	CRR073313	Silver flowering 2	0.244
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	2.165
	CRR073316	Gold flowering 2	2.374
	CRR073317	Gold flowering 3	2.313
	CRR073318	Tawny withering 1	1.659
	CRR073319	Tawny withering 2	1.030
	CRR073320	Tawny withering 3	1.400