Detail information of GWHGAAZE005768


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002528727.11.97473E-55protease U48 caax prenyl protease rce1, putative [Ricinus communis]
Swissprottr|Q8GW19|FACE2_ARATH2E-46CAAX prenyl protease 2
trEMBLtr|B9SRV8|B9SRV8_RICCO7E-56Protease U48 caax prenyl protease rce1, putative {ECO:0000313|EMBL:EEF33639.1}
TAIR10AT2G36305.13E-39farnesylated protein-converting enzyme 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1350511413506743-
GWHAAZE00000002mRNA1350511413506743-
GWHAAZE00000002exon1350641913506743-
GWHAAZE00000002exon1350552713505586-
GWHAAZE00000002exon1350511413505365-
GWHAAZE00000002five_prime_UTR1350668913506743-
GWHAAZE00000002CDS1350641913506688-
GWHAAZE00000002CDS1350552713505586-
GWHAAZE00000002CDS1350511413505365-
Transcript Sequence

Network for GWHGAAZE005768

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08658RCE1, FACE2 Biosynthesis of secondary metabolites map01110
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.431
SRR3591706second leaf5.559
SRR3591707mature leaf4.187
SRR3591708Shoot apex15.123
SRR3591709Stem9.960
SRR3591710White floral bud6.975
SRR3591711White flower6.867
SRR3591712Green floral bud9.526
SRR3591713Yellow flower7.826
SRP173429 SRR8316895Juvenile bud stage 5.889
SRR8316896Juvenile bud stage 8.838
SRR8316897Juvenile bud stage 3.523
SRR8316894Third green stage 3.565
SRR8316900Third green stage 9.650
SRR8316901Third green stage 9.439
SRR8316898Complete white stage 2.898
SRR8316899Complete white stage 10.118
SRR8316903Complete white stage 4.017
SRR8316902Silver flowering stage3.801
SRR8316904Silver flowering stage3.863
SRR8316905Silver flowering stage1.819
SRR8316906Gold flowering stage 6.894
SRR8316907Gold flowering stage 8.101
SRR8316908Gold flowering stage 6.215
SRP132670SRR6706286Control9.616
SRR6706287Light intensity 50%8.568
SRR6706288Light intensity 20%11.476
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.076
CNS0095593Slightly white alabastrum(diploid) 24.844
CNS0095594Slightly white alabastrum(diploid) 36.251
CNS0095595Whole white alabastrum(diploid) 26.557
CNS0095596Whole white alabastrum(diploid) 36.716
CNS0095597Whole white alabastrum(diploid) 45.431
CNS0095598Silvery flower (diploied) 12.469
CNS0095599Silvery flower (diploied) 23.592
CNS0095600Silvery flower (diploied) 34.663
CNS0095601Golden flower (diploid) 12.848
CNS0095602Golden flower (diploid) 24.527
CNS0095603Golden flower (diploid) 34.307
CNS0095604Slightly white alabastrum(tetraploid) 112.019
CNS0095605Slightly white alabastrum(tetraploid) 28.636
CNS0095606Slightly white alabastrum(tetraploid) 316.286
CNS0095607Whole white alabastrum(tetraploid) 17.679
CNS0095608Whole white alabastrum(tetraploid) 25.848
CNS0095609Whole white alabastrum(tetraploid) 310.160
CNS0095610Silvery flower (tetraploid) 16.146
CNS0095611Silvery flower (tetraploid) 29.182
CNS0095612Silvery flower (tetraploid) 38.580
CNS0095613Golden flower (tetraploid) 15.720
CNS0095614Golden flower (tetraploid) 26.962
CNS0095615Golden flower (tetraploid) 36.071
CRA001975CRR073297Stem 17.662
CRR073298Stem 27.107
CRR073299Stem 36.017
CRR073300Leaf 19.526
CRR073301Leaf 26.641
CRR073302Leaf 35.242
CRR073303Juvenile bud 15.221
CRR073304Juvenile bud 28.136
CRR073305Juvenile bud 35.457
CRR073306Third green 13.151
CRR073307Third green 21.448
CRR073308Third green 32.212
CRR073309Second white 12.045
CRR073310Second white 21.025
CRR073311Second white 31.870
CRR073312Silver flowering 13.616
CRR073313Silver flowering 23.814
CRR073314Silver flowering 32.070
CRR073315Gold flowering 10.571
CRR073316Gold flowering 21.709
CRR073317Gold flowering 31.542
CRR073318Tawny withering 15.340
CRR073319Tawny withering 23.568
CRR073320Tawny withering 34.012