Detail information of GWHGAAZE005789


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010654459.11.3369E-107PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X4 [Vitis vinifera]
trEMBLtr|F6HXY1|F6HXY1_VITVI6E-107Putative uncharacterized protein {ECO:0000313|EMBL:CCB59304.1}
TAIR10AT3G11470.22E-614'-phosphopantetheinyl transferase superfamily

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1390488013907676-
GWHAAZE00000002mRNA1390488013907676-
GWHAAZE00000002exon1390758413907676-
GWHAAZE00000002exon1390734613907447-
GWHAAZE00000002exon1390708713907242-
GWHAAZE00000002exon1390634113906460-
GWHAAZE00000002exon1390553713905666-
GWHAAZE00000002exon1390488013904989-
GWHAAZE00000002CDS1390758413907676-
GWHAAZE00000002CDS1390734613907447-
GWHAAZE00000002CDS1390708713907242-
GWHAAZE00000002CDS1390634113906460-
GWHAAZE00000002CDS1390553713905666-
GWHAAZE00000002CDS1390488013904989-
Transcript Sequence

Network for GWHGAAZE005789

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01648.21ACPS651659.60E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06133LYS5, acpT Pantothenate and CoA biosynthesis map00770

Gene Ontology

GO term OntologyName
GO:0000287molecular_functionmagnesium ion binding
GO:0008897molecular_functionholo-[acyl-carrier-protein] synthase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.808
SRR3591706second leaf21.934
SRR3591707mature leaf23.322
SRR3591708Shoot apex24.661
SRR3591709Stem24.530
SRR3591710White floral bud17.631
SRR3591711White flower21.860
SRR3591712Green floral bud24.188
SRR3591713Yellow flower22.934
SRP173429 SRR8316895Juvenile bud stage 25.856
SRR8316896Juvenile bud stage 37.747
SRR8316897Juvenile bud stage 20.533
SRR8316894Third green stage 7.049
SRR8316900Third green stage 19.934
SRR8316901Third green stage 22.660
SRR8316898Complete white stage 7.851
SRR8316899Complete white stage 36.350
SRR8316903Complete white stage 11.947
SRR8316902Silver flowering stage4.558
SRR8316904Silver flowering stage6.865
SRR8316905Silver flowering stage3.578
SRR8316906Gold flowering stage 7.679
SRR8316907Gold flowering stage 9.138
SRR8316908Gold flowering stage 9.966
SRP132670SRR6706286Control16.444
SRR6706287Light intensity 50%15.140
SRR6706288Light intensity 20%18.474
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.488
CNS0095593Slightly white alabastrum(diploid) 237.423
CNS0095594Slightly white alabastrum(diploid) 328.674
CNS0095595Whole white alabastrum(diploid) 225.904
CNS0095596Whole white alabastrum(diploid) 313.243
CNS0095597Whole white alabastrum(diploid) 416.720
CNS0095598Silvery flower (diploied) 124.660
CNS0095599Silvery flower (diploied) 221.467
CNS0095600Silvery flower (diploied) 324.133
CNS0095601Golden flower (diploid) 123.602
CNS0095602Golden flower (diploid) 224.761
CNS0095603Golden flower (diploid) 324.826
CNS0095604Slightly white alabastrum(tetraploid) 112.892
CNS0095605Slightly white alabastrum(tetraploid) 211.006
CNS0095606Slightly white alabastrum(tetraploid) 318.879
CNS0095607Whole white alabastrum(tetraploid) 112.432
CNS0095608Whole white alabastrum(tetraploid) 213.477
CNS0095609Whole white alabastrum(tetraploid) 315.567
CNS0095610Silvery flower (tetraploid) 120.958
CNS0095611Silvery flower (tetraploid) 222.343
CNS0095612Silvery flower (tetraploid) 312.746
CNS0095613Golden flower (tetraploid) 111.271
CNS0095614Golden flower (tetraploid) 213.975
CNS0095615Golden flower (tetraploid) 38.872
CRA001975CRR073297Stem 130.253
CRR073298Stem 223.981
CRR073299Stem 324.816
CRR073300Leaf 133.223
CRR073301Leaf 227.076
CRR073302Leaf 316.905
CRR073303Juvenile bud 127.337
CRR073304Juvenile bud 219.387
CRR073305Juvenile bud 328.190
CRR073306Third green 17.735
CRR073307Third green 25.975
CRR073308Third green 35.326
CRR073309Second white 16.140
CRR073310Second white 27.957
CRR073311Second white 35.149
CRR073312Silver flowering 17.826
CRR073313Silver flowering 25.078
CRR073314Silver flowering 37.740
CRR073315Gold flowering 137.971
CRR073316Gold flowering 247.344
CRR073317Gold flowering 337.680
CRR073318Tawny withering 121.707
CRR073319Tawny withering 221.032
CRR073320Tawny withering 314.350