Detail information of GWHGAAZE005808


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010654112.10PREDICTED: uncharacterized protein LOC104880154 [Vitis vinifera]
Swissprottr|Q94BP3|FAO4B_ARATH0.00000002Long-chain-alcohol oxidase FAO4B
trEMBLtr|A5C2R4|A5C2R4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN62038.1}
TAIR10AT4G28570.10.00000002Long-chain fatty alcohol dehydrogenase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1418052514186359-
GWHAAZE00000002mRNA1418052514186359-
GWHAAZE00000002exon1418052514181262-
GWHAAZE00000002exon1418179614182001-
GWHAAZE00000002exon1418209814182340-
GWHAAZE00000002exon1418242814182771-
GWHAAZE00000002exon1418299014183924-
GWHAAZE00000002exon1418442414184548-
GWHAAZE00000002exon1418477514184940-
GWHAAZE00000002exon1418526814185687-
GWHAAZE00000002exon1418595114186234-
GWHAAZE00000002exon1418632614186359-
GWHAAZE00000002CDS1418632614186359-
GWHAAZE00000002CDS1418595114186234-
GWHAAZE00000002CDS1418526814185687-
GWHAAZE00000002CDS1418477514184940-
GWHAAZE00000002CDS1418442414184548-
GWHAAZE00000002CDS1418299014183924-
GWHAAZE00000002CDS1418242814182771-
GWHAAZE00000002CDS1418209814182340-
GWHAAZE00000002CDS1418179614182001-
GWHAAZE00000002CDS1418052514181262-
Transcript Sequence

Network for GWHGAAZE005808

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00732.20GMC_oxred_N372628.80E-10
PF05199.14GMC_oxred_C4425137.20E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016614molecular_functionoxidoreductase activity, acting on CH-OH group of donors
GO:0050660molecular_functionflavin adenine dinucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.258
SRR3591706second leaf0.478
SRR3591707mature leaf0.105
SRR3591708Shoot apex0.644
SRR3591709Stem0.242
SRR3591710White floral bud0.047
SRR3591711White flower0.130
SRR3591712Green floral bud0.479
SRR3591713Yellow flower0.067
SRP173429 SRR8316895Juvenile bud stage 1.510
SRR8316896Juvenile bud stage 2.527
SRR8316897Juvenile bud stage 1.206
SRR8316894Third green stage 1.559
SRR8316900Third green stage 4.149
SRR8316901Third green stage 3.051
SRR8316898Complete white stage 0.137
SRR8316899Complete white stage 1.479
SRR8316903Complete white stage 0.208
SRR8316902Silver flowering stage0.254
SRR8316904Silver flowering stage0.183
SRR8316905Silver flowering stage0.095
SRR8316906Gold flowering stage 0.594
SRR8316907Gold flowering stage 0.364
SRR8316908Gold flowering stage 0.308
SRP132670SRR6706286Control2.782
SRR6706287Light intensity 50%2.270
SRR6706288Light intensity 20%2.911
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.013
CNS0095593Slightly white alabastrum(diploid) 21.846
CNS0095594Slightly white alabastrum(diploid) 31.420
CNS0095595Whole white alabastrum(diploid) 22.108
CNS0095596Whole white alabastrum(diploid) 32.121
CNS0095597Whole white alabastrum(diploid) 41.570
CNS0095598Silvery flower (diploied) 11.019
CNS0095599Silvery flower (diploied) 21.552
CNS0095600Silvery flower (diploied) 31.310
CNS0095601Golden flower (diploid) 10.849
CNS0095602Golden flower (diploid) 20.725
CNS0095603Golden flower (diploid) 30.436
CNS0095604Slightly white alabastrum(tetraploid) 10.200
CNS0095605Slightly white alabastrum(tetraploid) 20.116
CNS0095606Slightly white alabastrum(tetraploid) 30.269
CNS0095607Whole white alabastrum(tetraploid) 10.086
CNS0095608Whole white alabastrum(tetraploid) 20.104
CNS0095609Whole white alabastrum(tetraploid) 30.196
CNS0095610Silvery flower (tetraploid) 10.001
CNS0095611Silvery flower (tetraploid) 20.048
CNS0095612Silvery flower (tetraploid) 30.039
CNS0095613Golden flower (tetraploid) 10.054
CNS0095614Golden flower (tetraploid) 20.020
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 12.767
CRR073298Stem 22.744
CRR073299Stem 31.259
CRR073300Leaf 12.502
CRR073301Leaf 23.027
CRR073302Leaf 31.999
CRR073303Juvenile bud 11.025
CRR073304Juvenile bud 21.127
CRR073305Juvenile bud 31.549
CRR073306Third green 10.098
CRR073307Third green 20.080
CRR073308Third green 30.053
CRR073309Second white 10.117
CRR073310Second white 20.208
CRR073311Second white 30.132
CRR073312Silver flowering 10.041
CRR073313Silver flowering 20.235
CRR073314Silver flowering 30.002
CRR073315Gold flowering 10.240
CRR073316Gold flowering 20.805
CRR073317Gold flowering 30.740
CRR073318Tawny withering 10.334
CRR073319Tawny withering 20.537
CRR073320Tawny withering 30.332