Detail information of GWHGAAZE005819


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI30344.31.30169E-60unnamed protein product [Vitis vinifera]
Swissprottr|Q8GYJ2|Y2608_ARATH5E-55B3 domain-containing protein At2g36080
trEMBLtr|F6HKN6|F6HKN6_VITVI9E-61Putative uncharacterized protein {ECO:0000313|EMBL:CCB55458.1}
TAIR10AT5G06250.23E-45AP2/B3-like transcriptional factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1446040714460826-
GWHAAZE00000002mRNA1446040714460826-
GWHAAZE00000002exon1446040714460826-
GWHAAZE00000002CDS1446040714460826-
Transcript Sequence

Network for GWHGAAZE005819

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.22B321055.80E-31
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.282
SRR3591706second leaf15.265
SRR3591707mature leaf4.847
SRR3591708Shoot apex13.211
SRR3591709Stem3.858
SRR3591710White floral bud6.128
SRR3591711White flower16.684
SRR3591712Green floral bud3.764
SRR3591713Yellow flower23.903
SRP173429 SRR8316895Juvenile bud stage 1.034
SRR8316896Juvenile bud stage 0.079
SRR8316897Juvenile bud stage 0.328
SRR8316894Third green stage 0.015
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.276
SRR8316898Complete white stage 0.140
SRR8316899Complete white stage 0.048
SRR8316903Complete white stage 0.566
SRR8316902Silver flowering stage11.769
SRR8316904Silver flowering stage7.902
SRR8316905Silver flowering stage0.686
SRR8316906Gold flowering stage 0.593
SRR8316907Gold flowering stage 2.920
SRR8316908Gold flowering stage 1.543
SRP132670SRR6706286Control0.365
SRR6706287Light intensity 50%0.464
SRR6706288Light intensity 20%0.466
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.863
CNS0095593Slightly white alabastrum(diploid) 20.125
CNS0095594Slightly white alabastrum(diploid) 31.167
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.060
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.100
CNS0095599Silvery flower (diploied) 21.977
CNS0095600Silvery flower (diploied) 31.978
CNS0095601Golden flower (diploid) 10.549
CNS0095602Golden flower (diploid) 24.077
CNS0095603Golden flower (diploid) 35.139
CNS0095604Slightly white alabastrum(tetraploid) 10.441
CNS0095605Slightly white alabastrum(tetraploid) 20.599
CNS0095606Slightly white alabastrum(tetraploid) 30.674
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 13.047
CNS0095611Silvery flower (tetraploid) 22.301
CNS0095612Silvery flower (tetraploid) 30.969
CNS0095613Golden flower (tetraploid) 11.297
CNS0095614Golden flower (tetraploid) 23.281
CNS0095615Golden flower (tetraploid) 31.543
CRA001975CRR073297Stem 11.132
CRR073298Stem 21.034
CRR073299Stem 31.229
CRR073300Leaf 10.499
CRR073301Leaf 20.920
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.151
CRR073305Juvenile bud 30.164
CRR073306Third green 12.534
CRR073307Third green 20.738
CRR073308Third green 34.690
CRR073309Second white 10.516
CRR073310Second white 24.064
CRR073311Second white 31.642
CRR073312Silver flowering 112.336
CRR073313Silver flowering 218.865
CRR073314Silver flowering 312.012
CRR073315Gold flowering 10.812
CRR073316Gold flowering 21.025
CRR073317Gold flowering 30.718
CRR073318Tawny withering 15.314
CRR073319Tawny withering 211.242
CRR073320Tawny withering 31.902