Detail information of GWHGAAZE005844


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFK39482.12.00038E-85unknown [Lotus japonicus]
Swissprottr|Q9CAI3|CADH1_ARATH2E-78Probable cinnamyl alcohol dehydrogenase 1
trEMBLtr|I3SGU0|I3SGU0_LOTJA7E-86Uncharacterized protein {ECO:0000313|EMBL:AFK39482.1}
TAIR10AT1G72680.13E-61cinnamyl-alcohol dehydrogenase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1486586214867065+
GWHAAZE00000002mRNA1486586214867065+
GWHAAZE00000002exon1486586214866065+
GWHAAZE00000002exon1486662214866709+
GWHAAZE00000002exon1486686914867065+
GWHAAZE00000002CDS1486586214866065+
GWHAAZE00000002CDS1486662214866709+
GWHAAZE00000002CDS1486686914867065+
Transcript Sequence

Network for GWHGAAZE005844

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00107.27ADH_zinc_N201401.60E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00083CAD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.320
SRR3591706second leaf3.248
SRR3591707mature leaf8.578
SRR3591708Shoot apex3.157
SRR3591709Stem7.026
SRR3591710White floral bud7.649
SRR3591711White flower11.753
SRR3591712Green floral bud7.251
SRR3591713Yellow flower28.638
SRP173429 SRR8316895Juvenile bud stage 11.299
SRR8316896Juvenile bud stage 16.594
SRR8316897Juvenile bud stage 1.719
SRR8316894Third green stage 5.475
SRR8316900Third green stage 17.003
SRR8316901Third green stage 19.538
SRR8316898Complete white stage 10.239
SRR8316899Complete white stage 26.256
SRR8316903Complete white stage 16.115
SRR8316902Silver flowering stage13.209
SRR8316904Silver flowering stage17.146
SRR8316905Silver flowering stage12.205
SRR8316906Gold flowering stage 34.827
SRR8316907Gold flowering stage 28.694
SRR8316908Gold flowering stage 25.679
SRP132670SRR6706286Control18.412
SRR6706287Light intensity 50%8.178
SRR6706288Light intensity 20%8.505
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.432
CNS0095593Slightly white alabastrum(diploid) 219.048
CNS0095594Slightly white alabastrum(diploid) 312.828
CNS0095595Whole white alabastrum(diploid) 222.878
CNS0095596Whole white alabastrum(diploid) 318.430
CNS0095597Whole white alabastrum(diploid) 410.846
CNS0095598Silvery flower (diploied) 131.592
CNS0095599Silvery flower (diploied) 228.618
CNS0095600Silvery flower (diploied) 326.797
CNS0095601Golden flower (diploid) 144.759
CNS0095602Golden flower (diploid) 255.945
CNS0095603Golden flower (diploid) 356.386
CNS0095604Slightly white alabastrum(tetraploid) 18.315
CNS0095605Slightly white alabastrum(tetraploid) 28.678
CNS0095606Slightly white alabastrum(tetraploid) 311.296
CNS0095607Whole white alabastrum(tetraploid) 17.589
CNS0095608Whole white alabastrum(tetraploid) 27.608
CNS0095609Whole white alabastrum(tetraploid) 313.739
CNS0095610Silvery flower (tetraploid) 127.599
CNS0095611Silvery flower (tetraploid) 223.560
CNS0095612Silvery flower (tetraploid) 318.561
CNS0095613Golden flower (tetraploid) 136.961
CNS0095614Golden flower (tetraploid) 246.546
CNS0095615Golden flower (tetraploid) 343.411
CRA001975CRR073297Stem 110.809
CRR073298Stem 28.348
CRR073299Stem 38.457
CRR073300Leaf 113.909
CRR073301Leaf 27.411
CRR073302Leaf 39.276
CRR073303Juvenile bud 115.960
CRR073304Juvenile bud 218.392
CRR073305Juvenile bud 315.042
CRR073306Third green 120.341
CRR073307Third green 211.941
CRR073308Third green 317.507
CRR073309Second white 134.791
CRR073310Second white 220.008
CRR073311Second white 310.455
CRR073312Silver flowering 125.000
CRR073313Silver flowering 216.979
CRR073314Silver flowering 320.204
CRR073315Gold flowering 114.165
CRR073316Gold flowering 218.410
CRR073317Gold flowering 310.835
CRR073318Tawny withering 118.613
CRR073319Tawny withering 223.517
CRR073320Tawny withering 310.806