Detail information of GWHGAAZE005877


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002272230.12.159E-136PREDICTED: uncharacterized protein LOC100244469 [Vitis vinifera]
Swissprottr|Q9ZUA9|Y2181_ARATH0.000000008PHD finger protein At2g01810
trEMBLtr|F6HU84|F6HU84_VITVI8E-137Putative uncharacterized protein {ECO:0000313|EMBL:CCB58307.1}
TAIR10AT1G32810.23E-79RING/FYVE/PHD zinc finger superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1542162415423291-
GWHAAZE00000002mRNA1542162415423291-
GWHAAZE00000002exon1542162415421635-
GWHAAZE00000002exon1542173415422167-
GWHAAZE00000002exon1542247515423291-
GWHAAZE00000002CDS1542247515423291-
GWHAAZE00000002CDS1542173415422167-
GWHAAZE00000002CDS1542162415421635-
Transcript Sequence

Network for GWHGAAZE005877

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00628.30PHD26693.30E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.883
SRR3591706second leaf12.738
SRR3591707mature leaf18.347
SRR3591708Shoot apex12.343
SRR3591709Stem11.069
SRR3591710White floral bud16.305
SRR3591711White flower18.572
SRR3591712Green floral bud10.709
SRR3591713Yellow flower11.851
SRP173429 SRR8316895Juvenile bud stage 6.909
SRR8316896Juvenile bud stage 8.325
SRR8316897Juvenile bud stage 4.053
SRR8316894Third green stage 3.789
SRR8316900Third green stage 8.839
SRR8316901Third green stage 7.548
SRR8316898Complete white stage 3.688
SRR8316899Complete white stage 10.405
SRR8316903Complete white stage 8.411
SRR8316902Silver flowering stage3.936
SRR8316904Silver flowering stage7.379
SRR8316905Silver flowering stage3.782
SRR8316906Gold flowering stage 11.696
SRR8316907Gold flowering stage 12.017
SRR8316908Gold flowering stage 11.145
SRP132670SRR6706286Control14.096
SRR6706287Light intensity 50%14.420
SRR6706288Light intensity 20%12.344
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.434
CNS0095593Slightly white alabastrum(diploid) 22.067
CNS0095594Slightly white alabastrum(diploid) 32.818
CNS0095595Whole white alabastrum(diploid) 23.038
CNS0095596Whole white alabastrum(diploid) 31.496
CNS0095597Whole white alabastrum(diploid) 42.237
CNS0095598Silvery flower (diploied) 19.608
CNS0095599Silvery flower (diploied) 26.970
CNS0095600Silvery flower (diploied) 312.233
CNS0095601Golden flower (diploid) 18.081
CNS0095602Golden flower (diploid) 215.574
CNS0095603Golden flower (diploid) 314.642
CNS0095604Slightly white alabastrum(tetraploid) 15.190
CNS0095605Slightly white alabastrum(tetraploid) 23.265
CNS0095606Slightly white alabastrum(tetraploid) 313.850
CNS0095607Whole white alabastrum(tetraploid) 13.783
CNS0095608Whole white alabastrum(tetraploid) 21.072
CNS0095609Whole white alabastrum(tetraploid) 37.586
CNS0095610Silvery flower (tetraploid) 114.632
CNS0095611Silvery flower (tetraploid) 213.640
CNS0095612Silvery flower (tetraploid) 312.127
CNS0095613Golden flower (tetraploid) 16.061
CNS0095614Golden flower (tetraploid) 210.719
CNS0095615Golden flower (tetraploid) 313.927
CRA001975CRR073297Stem 116.112
CRR073298Stem 214.872
CRR073299Stem 310.161
CRR073300Leaf 114.076
CRR073301Leaf 210.833
CRR073302Leaf 311.319
CRR073303Juvenile bud 15.065
CRR073304Juvenile bud 26.592
CRR073305Juvenile bud 312.034
CRR073306Third green 18.095
CRR073307Third green 24.283
CRR073308Third green 36.551
CRR073309Second white 15.356
CRR073310Second white 27.425
CRR073311Second white 39.668
CRR073312Silver flowering 18.448
CRR073313Silver flowering 27.765
CRR073314Silver flowering 35.981
CRR073315Gold flowering 16.492
CRR073316Gold flowering 215.064
CRR073317Gold flowering 37.764
CRR073318Tawny withering 18.242
CRR073319Tawny withering 26.153
CRR073320Tawny withering 35.825