Detail information of GWHGAAZE005963


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007209127.15.31591E-32hypothetical protein PRUPE_ppa005529mg [Prunus persica]
trEMBLtr|M5WAI7|M5WAI7_PRUPE2E-32DNA primase {ECO:0000256|RuleBase:RU003514}
TAIR10AT5G41880.11E-17DNA primases;DNA primases

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1695135416955026-
GWHAAZE00000002mRNA1695135416955026-
GWHAAZE00000002exon1695491816955026-
GWHAAZE00000002exon1695385516953928-
GWHAAZE00000002exon1695197216952020-
GWHAAZE00000002exon1695135416951433-
GWHAAZE00000002CDS1695491816955026-
GWHAAZE00000002CDS1695385516953928-
GWHAAZE00000002CDS1695197216952020-
GWHAAZE00000002CDS1695135416951433-
Transcript Sequence

Network for GWHGAAZE005963

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02684PRI1 DNA replication map03030

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.954
SRR3591706second leaf1.980
SRR3591707mature leaf0.828
SRR3591708Shoot apex15.852
SRR3591709Stem4.609
SRR3591710White floral bud1.734
SRR3591711White flower0.619
SRR3591712Green floral bud2.678
SRR3591713Yellow flower1.098
SRP173429 SRR8316895Juvenile bud stage 4.429
SRR8316896Juvenile bud stage 5.541
SRR8316897Juvenile bud stage 2.079
SRR8316894Third green stage 1.234
SRR8316900Third green stage 4.255
SRR8316901Third green stage 3.187
SRR8316898Complete white stage 1.098
SRR8316899Complete white stage 4.018
SRR8316903Complete white stage 2.282
SRR8316902Silver flowering stage0.948
SRR8316904Silver flowering stage1.098
SRR8316905Silver flowering stage0.956
SRR8316906Gold flowering stage 1.716
SRR8316907Gold flowering stage 0.840
SRR8316908Gold flowering stage 0.407
SRP132670SRR6706286Control1.023
SRR6706287Light intensity 50%1.267
SRR6706288Light intensity 20%1.235
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.444
CNS0095593Slightly white alabastrum(diploid) 24.957
CNS0095594Slightly white alabastrum(diploid) 35.264
CNS0095595Whole white alabastrum(diploid) 22.889
CNS0095596Whole white alabastrum(diploid) 32.559
CNS0095597Whole white alabastrum(diploid) 42.087
CNS0095598Silvery flower (diploied) 12.099
CNS0095599Silvery flower (diploied) 24.519
CNS0095600Silvery flower (diploied) 31.854
CNS0095601Golden flower (diploid) 12.368
CNS0095602Golden flower (diploid) 22.099
CNS0095603Golden flower (diploid) 30.751
CNS0095604Slightly white alabastrum(tetraploid) 16.130
CNS0095605Slightly white alabastrum(tetraploid) 27.372
CNS0095606Slightly white alabastrum(tetraploid) 34.067
CNS0095607Whole white alabastrum(tetraploid) 12.986
CNS0095608Whole white alabastrum(tetraploid) 22.208
CNS0095609Whole white alabastrum(tetraploid) 31.955
CNS0095610Silvery flower (tetraploid) 11.671
CNS0095611Silvery flower (tetraploid) 21.121
CNS0095612Silvery flower (tetraploid) 31.786
CNS0095613Golden flower (tetraploid) 11.006
CNS0095614Golden flower (tetraploid) 20.986
CNS0095615Golden flower (tetraploid) 30.042
CRA001975CRR073297Stem 12.359
CRR073298Stem 23.679
CRR073299Stem 34.553
CRR073300Leaf 11.028
CRR073301Leaf 21.760
CRR073302Leaf 30.816
CRR073303Juvenile bud 11.087
CRR073304Juvenile bud 20.305
CRR073305Juvenile bud 30.429
CRR073306Third green 10.191
CRR073307Third green 20.000
CRR073308Third green 30.202
CRR073309Second white 10.185
CRR073310Second white 20.000
CRR073311Second white 30.251
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.149
CRR073315Gold flowering 10.789
CRR073316Gold flowering 21.568
CRR073317Gold flowering 30.536
CRR073318Tawny withering 13.041
CRR073319Tawny withering 25.180
CRR073320Tawny withering 35.871