Detail information of GWHGAAZE005987


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003521791.13.3206E-178PREDICTED: F-box/kelch-repeat protein At3g61590-like [Glycine max]
Swissprottr|Q9M310|FBK77_ARATH6E-154F-box/kelch-repeat protein At3g61590
trEMBLtr|I1JRW3|I1JRW3_SOYBN1E-178Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G41530.1}
TAIR10AT3G61590.24E-124Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1739743217398682-
GWHAAZE00000002mRNA1739743217398682-
GWHAAZE00000002exon1739743217398682-
GWHAAZE00000002CDS1739743217398682-
Transcript Sequence

Network for GWHGAAZE005987

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf25.354
SRR3591706second leaf30.781
SRR3591707mature leaf31.059
SRR3591708Shoot apex23.385
SRR3591709Stem32.063
SRR3591710White floral bud22.647
SRR3591711White flower37.786
SRR3591712Green floral bud33.622
SRR3591713Yellow flower29.189
SRP173429 SRR8316895Juvenile bud stage 36.760
SRR8316896Juvenile bud stage 61.297
SRR8316897Juvenile bud stage 29.236
SRR8316894Third green stage 17.484
SRR8316900Third green stage 37.759
SRR8316901Third green stage 45.398
SRR8316898Complete white stage 8.407
SRR8316899Complete white stage 23.187
SRR8316903Complete white stage 11.347
SRR8316902Silver flowering stage12.727
SRR8316904Silver flowering stage14.854
SRR8316905Silver flowering stage6.214
SRR8316906Gold flowering stage 23.569
SRR8316907Gold flowering stage 22.554
SRR8316908Gold flowering stage 21.023
SRP132670SRR6706286Control16.884
SRR6706287Light intensity 50%17.732
SRR6706288Light intensity 20%18.433
CNP0000432CNS0095592Slightly white alabastrum(diploid) 156.971
CNS0095593Slightly white alabastrum(diploid) 242.124
CNS0095594Slightly white alabastrum(diploid) 364.572
CNS0095595Whole white alabastrum(diploid) 230.905
CNS0095596Whole white alabastrum(diploid) 332.970
CNS0095597Whole white alabastrum(diploid) 426.584
CNS0095598Silvery flower (diploied) 126.850
CNS0095599Silvery flower (diploied) 228.351
CNS0095600Silvery flower (diploied) 328.176
CNS0095601Golden flower (diploid) 121.807
CNS0095602Golden flower (diploid) 233.316
CNS0095603Golden flower (diploid) 326.242
CNS0095604Slightly white alabastrum(tetraploid) 183.957
CNS0095605Slightly white alabastrum(tetraploid) 286.154
CNS0095606Slightly white alabastrum(tetraploid) 327.306
CNS0095607Whole white alabastrum(tetraploid) 166.107
CNS0095608Whole white alabastrum(tetraploid) 253.302
CNS0095609Whole white alabastrum(tetraploid) 353.517
CNS0095610Silvery flower (tetraploid) 133.507
CNS0095611Silvery flower (tetraploid) 227.932
CNS0095612Silvery flower (tetraploid) 328.785
CNS0095613Golden flower (tetraploid) 128.323
CNS0095614Golden flower (tetraploid) 233.579
CNS0095615Golden flower (tetraploid) 330.140
CRA001975CRR073297Stem 131.933
CRR073298Stem 225.245
CRR073299Stem 317.822
CRR073300Leaf 117.485
CRR073301Leaf 220.577
CRR073302Leaf 313.670
CRR073303Juvenile bud 19.147
CRR073304Juvenile bud 28.933
CRR073305Juvenile bud 310.636
CRR073306Third green 117.294
CRR073307Third green 213.297
CRR073308Third green 312.490
CRR073309Second white 117.478
CRR073310Second white 222.586
CRR073311Second white 321.178
CRR073312Silver flowering 117.729
CRR073313Silver flowering 216.523
CRR073314Silver flowering 317.607
CRR073315Gold flowering 122.244
CRR073316Gold flowering 230.954
CRR073317Gold flowering 320.525
CRR073318Tawny withering 117.333
CRR073319Tawny withering 230.715
CRR073320Tawny withering 322.709