Detail information of GWHGAAZE006009


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP25376.14.1582E-179hypothetical protein JCGZ_20532 [Jatropha curcas]
Swissprottr|Q0JL44|SGT1_ORYSJ4E-154Protein SGT1 homolog
trEMBLtr|A0A067JN12|A0A067JN12_JATCU2E-179Uncharacterized protein {ECO:0000313|EMBL:KDP25376.1}
TAIR10AT4G11260.12E-110phosphatase-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1778859717793502-
GWHAAZE00000002mRNA1778859717793502-
GWHAAZE00000002exon1778859717788704-
GWHAAZE00000002exon1778917517789279-
GWHAAZE00000002exon1778960117789683-
GWHAAZE00000002exon1778987317790011-
GWHAAZE00000002exon1779009817790163-
GWHAAZE00000002exon1779029317790389-
GWHAAZE00000002exon1779173017791904-
GWHAAZE00000002exon1779223317792357-
GWHAAZE00000002exon1779276417792833-
GWHAAZE00000002exon1779334317793502-
GWHAAZE00000002CDS1779334317793502-
GWHAAZE00000002CDS1779276417792833-
GWHAAZE00000002CDS1779223317792357-
GWHAAZE00000002CDS1779173017791904-
GWHAAZE00000002CDS1779029317790389-
GWHAAZE00000002CDS1779009817790163-
GWHAAZE00000002CDS1778987317790011-
GWHAAZE00000002CDS1778960117789683-
GWHAAZE00000002CDS1778917517789279-
GWHAAZE00000002CDS1778859717788704-
Transcript Sequence

Network for GWHGAAZE006009

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13181.7TPR_836670.021
PF13181.7TPR_870930.15
PF04969.17CS1772524.80E-14
PF05002.16SGS2943737.10E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12795SUGT1, SGT1 NOD-like receptor signaling pathway map04621
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf42.000
SRR3591706second leaf6.732
SRR3591707mature leaf18.190
SRR3591708Shoot apex23.732
SRR3591709Stem30.920
SRR3591710White floral bud8.963
SRR3591711White flower19.527
SRR3591712Green floral bud11.382
SRR3591713Yellow flower20.037
SRP173429 SRR8316895Juvenile bud stage 106.860
SRR8316896Juvenile bud stage 135.380
SRR8316897Juvenile bud stage 140.752
SRR8316894Third green stage 11.759
SRR8316900Third green stage 40.635
SRR8316901Third green stage 58.210
SRR8316898Complete white stage 6.317
SRR8316899Complete white stage 58.538
SRR8316903Complete white stage 8.387
SRR8316902Silver flowering stage24.691
SRR8316904Silver flowering stage27.620
SRR8316905Silver flowering stage19.917
SRR8316906Gold flowering stage 55.837
SRR8316907Gold flowering stage 46.755
SRR8316908Gold flowering stage 47.352
SRP132670SRR6706286Control22.334
SRR6706287Light intensity 50%29.281
SRR6706288Light intensity 20%25.337
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.412
CNS0095593Slightly white alabastrum(diploid) 225.293
CNS0095594Slightly white alabastrum(diploid) 321.265
CNS0095595Whole white alabastrum(diploid) 220.521
CNS0095596Whole white alabastrum(diploid) 38.561
CNS0095597Whole white alabastrum(diploid) 413.081
CNS0095598Silvery flower (diploied) 118.834
CNS0095599Silvery flower (diploied) 2159.847
CNS0095600Silvery flower (diploied) 377.217
CNS0095601Golden flower (diploid) 1250.411
CNS0095602Golden flower (diploid) 290.790
CNS0095603Golden flower (diploid) 384.493
CNS0095604Slightly white alabastrum(tetraploid) 116.077
CNS0095605Slightly white alabastrum(tetraploid) 219.394
CNS0095606Slightly white alabastrum(tetraploid) 332.342
CNS0095607Whole white alabastrum(tetraploid) 19.607
CNS0095608Whole white alabastrum(tetraploid) 212.221
CNS0095609Whole white alabastrum(tetraploid) 328.132
CNS0095610Silvery flower (tetraploid) 129.223
CNS0095611Silvery flower (tetraploid) 234.267
CNS0095612Silvery flower (tetraploid) 327.010
CNS0095613Golden flower (tetraploid) 126.208
CNS0095614Golden flower (tetraploid) 222.830
CNS0095615Golden flower (tetraploid) 311.373
CRA001975CRR073297Stem 110.322
CRR073298Stem 27.285
CRR073299Stem 37.652
CRR073300Leaf 115.882
CRR073301Leaf 213.982
CRR073302Leaf 313.656
CRR073303Juvenile bud 115.330
CRR073304Juvenile bud 29.813
CRR073305Juvenile bud 38.749
CRR073306Third green 18.184
CRR073307Third green 25.382
CRR073308Third green 310.468
CRR073309Second white 15.230
CRR073310Second white 28.533
CRR073311Second white 37.708
CRR073312Silver flowering 16.126
CRR073313Silver flowering 22.998
CRR073314Silver flowering 35.956
CRR073315Gold flowering 16.091
CRR073316Gold flowering 26.250
CRR073317Gold flowering 32.842
CRR073318Tawny withering 119.007
CRR073319Tawny withering 236.374
CRR073320Tawny withering 318.164