Detail information of GWHGAAZE006051


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002534556.11.12806E-08conserved hypothetical protein [Ricinus communis]
trEMBLtr|B9T8I7|B9T8I7_RICCO0.000000004Putative uncharacterized protein {ECO:0000313|EMBL:EEF27827.1}
TAIR10AT2G29800.10.001Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1859816618599404-
GWHAAZE00000002mRNA1859816618599404-
GWHAAZE00000002exon1859816618599404-
GWHAAZE00000002CDS1859816618599404-
Transcript Sequence

Network for GWHGAAZE006051

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0194


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07893.14DUF1668872139.80E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.658
SRR3591706second leaf9.932
SRR3591707mature leaf9.715
SRR3591708Shoot apex14.995
SRR3591709Stem12.923
SRR3591710White floral bud13.310
SRR3591711White flower12.761
SRR3591712Green floral bud16.851
SRR3591713Yellow flower13.004
SRP173429 SRR8316895Juvenile bud stage 9.021
SRR8316896Juvenile bud stage 13.060
SRR8316897Juvenile bud stage 5.568
SRR8316894Third green stage 4.957
SRR8316900Third green stage 19.222
SRR8316901Third green stage 17.356
SRR8316898Complete white stage 7.677
SRR8316899Complete white stage 21.714
SRR8316903Complete white stage 10.170
SRR8316902Silver flowering stage5.519
SRR8316904Silver flowering stage6.416
SRR8316905Silver flowering stage2.529
SRR8316906Gold flowering stage 10.967
SRR8316907Gold flowering stage 8.590
SRR8316908Gold flowering stage 10.430
SRP132670SRR6706286Control28.174
SRR6706287Light intensity 50%26.749
SRR6706288Light intensity 20%30.550
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.332
CNS0095593Slightly white alabastrum(diploid) 210.766
CNS0095594Slightly white alabastrum(diploid) 39.028
CNS0095595Whole white alabastrum(diploid) 212.213
CNS0095596Whole white alabastrum(diploid) 312.937
CNS0095597Whole white alabastrum(diploid) 412.901
CNS0095598Silvery flower (diploied) 19.790
CNS0095599Silvery flower (diploied) 212.943
CNS0095600Silvery flower (diploied) 316.584
CNS0095601Golden flower (diploid) 116.051
CNS0095602Golden flower (diploid) 219.913
CNS0095603Golden flower (diploid) 317.780
CNS0095604Slightly white alabastrum(tetraploid) 119.668
CNS0095605Slightly white alabastrum(tetraploid) 215.068
CNS0095606Slightly white alabastrum(tetraploid) 329.845
CNS0095607Whole white alabastrum(tetraploid) 114.501
CNS0095608Whole white alabastrum(tetraploid) 216.265
CNS0095609Whole white alabastrum(tetraploid) 330.713
CNS0095610Silvery flower (tetraploid) 125.022
CNS0095611Silvery flower (tetraploid) 230.725
CNS0095612Silvery flower (tetraploid) 322.767
CNS0095613Golden flower (tetraploid) 115.003
CNS0095614Golden flower (tetraploid) 222.703
CNS0095615Golden flower (tetraploid) 318.442
CRA001975CRR073297Stem 115.540
CRR073298Stem 214.471
CRR073299Stem 315.745
CRR073300Leaf 119.111
CRR073301Leaf 217.825
CRR073302Leaf 317.143
CRR073303Juvenile bud 118.375
CRR073304Juvenile bud 218.484
CRR073305Juvenile bud 320.002
CRR073306Third green 15.857
CRR073307Third green 26.724
CRR073308Third green 36.537
CRR073309Second white 17.766
CRR073310Second white 27.231
CRR073311Second white 35.634
CRR073312Silver flowering 16.693
CRR073313Silver flowering 26.177
CRR073314Silver flowering 34.973
CRR073315Gold flowering 13.279
CRR073316Gold flowering 24.684
CRR073317Gold flowering 34.259
CRR073318Tawny withering 110.478
CRR073319Tawny withering 27.155
CRR073320Tawny withering 37.199