Gene detail

Detail information of GWHGAAZE006100

Functional Annotation

Database	Orthologs	Annotation
Nr	CBI34719.3	unnamed protein product [Vitis vinifera]
Swissprot	tr\|Q7XU38\|C87A3_ORYSJ	Cytochrome P450 87A3
trEMBL	tr\|F6HUF3\|F6HUF3_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB58376.1}
TAIR10	AT1G12740.1	cytochrome P450, family 87, subfamily A, polypeptide 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	19329439	19332308	+
GWHAAZE00000002	mRNA	19329439	19332308	+
GWHAAZE00000002	exon	19329439	19329638	+
GWHAAZE00000002	exon	19329723	19330044	+
GWHAAZE00000002	exon	19330323	19330472	+
GWHAAZE00000002	exon	19330764	19331015	+
GWHAAZE00000002	exon	19331103	19331192	+
GWHAAZE00000002	exon	19331297	19331375	+
GWHAAZE00000002	exon	19331501	19331607	+
GWHAAZE00000002	exon	19331939	19332066	+
GWHAAZE00000002	exon	19332149	19332308	+
GWHAAZE00000002	CDS	19329439	19329638	+
GWHAAZE00000002	CDS	19329723	19330044	+
GWHAAZE00000002	CDS	19330323	19330472	+
GWHAAZE00000002	CDS	19330764	19331015	+
GWHAAZE00000002	CDS	19331103	19331192	+
GWHAAZE00000002	CDS	19331297	19331375	+
GWHAAZE00000002	CDS	19331501	19331607	+
GWHAAZE00000002	CDS	19331939	19332066	+
GWHAAZE00000002	CDS	19332149	19332308	+

Transcript Sequence
>GWHTAAZE006108 ATGTTGCCATTTGCTTTATTTATTGCAACTTTGGTTGTCATAAGCATTGTGCATTGGGTTTACAGCTGGAGGAATCCCAGATGTAATGGAAAATTGCCTCCAGGTTCAATGGGCTGGCCGCTTCTTGGTGAAACTCTTCAGTTCTTCTCCCCAAACACCTCCTCTGATATTCCTCCCTTTGTTAAAGAAAGAGTTGAAAGATATGGTCCGATATTTCGAACCAATTTGGTGGGGAGGCCAGTTATAGTGTCAGCAGATTCGGATCTTAACCACTTTGTGTTTCAACAAGAGGGTCAATTGTTCAAAAGTTGGTATCCAGATACCTTCACGGAGATCTTTGGGAAACAGAATGTAGGTTCCTTACATGGGTTTATGTATAAGTACCTAAAGAACATGGTTCTTAATTTATTCGGTGTTGAAAGCCTGAAAAAGATGCTGCCTGAAGTTGAACAAGCAGCAAGTAGAAACTTGAAAATGTGGTCCGGCCAGGACACCGTAGAATTAAAGGAAGCAACTGCAAGTATGATCTTTGATCTGACAGCAAAGAAACTGATCAGTTATGATCCAGAGAAGTCCTCAGAGAATCTAAGGGTGAATTTCATAGCTTTTATACAAGGACTAATCTCATTTCCTTTGGACATTCCCGGAACAGCTTATCATAAATGTTTACAGGGAAGAAAGAAGGCAATGAGGATGCTAAAGAACATGCTAGAGGAAAGACGAGCAAAGCCTAAGAAGCTCCAAACTGATTTCTTTGATTATGTACTCGAAGAACTTCAAAGAGAGGATACAATCCTTACAGAAGCAATTGCGCTAGATTTAATGTTTGTGCTACTCTTTGCCAGTTTTGAAACGACTTCCTTGGCGCTAACTTTAGCCACCAAACTTCTTGTGGACCATCCTTTAGTGTTGAAGGAATTAACGGAAGAACACGAGGCAATTCTAAGAAATCGGGAAAGTTTGGATTATGGGCTTACATGGAAAGAATACAAATCAATGAAATTTACATTTCAGTTTATCAATGAAACAGTAAGGCTAGCAAACATAGTTCCGGGAATTTTCAGAAAAGCTCTAAGCGATATCACGTTTAAAGACTATACCATTCCAGCTGGTTGGGCGGTTATGGTGTGTCCTCCAGCTGTGCATTTGAACCCTGCCAGATATGAAAATCCCCTTGACTTTAATCCATGGAGATGGGAGGGAATAGAATTAACAAGTGCATCAAAACATTTCATGGCTTTTGGAGGTGGCATGAGATTTTGTGTTGGAACAGATTTCACGAAGATGCAAATGGCTGTCTTTCTTCATTGCCTGGTTACTAAATATAGATGGCAACCAATTAAAGGAGGAGACATTGTCCGAACTCCAGGTTTACAATTCCCAAACGGCTTTCACATTCAGATCACTCAGAAAAATAAACAGGACCAGGACCAGGATCCAAGTAGCCTACCAACCAACAAAAAACTCTCATCAAACCTAGATGATTAA

Network for GWHGAAZE006100

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	33	456	2.80E-63

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.078
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.163
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.178
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.751
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.325
	SRR8316896	Juvenile bud stage	0.151
	SRR8316897	Juvenile bud stage	0.221
	SRR8316894	Third green stage	0.045
	SRR8316900	Third green stage	0.296
	SRR8316901	Third green stage	0.502
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.070
	SRR8316903	Complete white stage	0.069
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.120
	SRR6706287	Light intensity 50%	0.233
	SRR6706288	Light intensity 20%	0.130
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.336
	CNS0095594	Slightly white alabastrum(diploid) 3	0.657
	CNS0095595	Whole white alabastrum(diploid) 2	0.115
	CNS0095596	Whole white alabastrum(diploid) 3	0.367
	CNS0095597	Whole white alabastrum(diploid) 4	0.237
	CNS0095598	Silvery flower (diploied) 1	0.083
	CNS0095599	Silvery flower (diploied) 2	0.050
	CNS0095600	Silvery flower (diploied) 3	0.225
	CNS0095601	Golden flower (diploid) 1	0.032
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.062
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.432
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.312
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.238
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.060
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.021
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.028
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.179
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.002
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.002
	CRR073318	Tawny withering 1	0.107
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000