Detail information of GWHGAAZE006211


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP09917.10unnamed protein product [Coffea canephora]
trEMBLtr|A0A068UNM3|A0A068UNM3_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_41 {ECO:0000313|EMBL:CDP09917.1}
TAIR10AT1G12230.19E-153Aldolase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2116176821168290-
GWHAAZE00000002mRNA2116176821168290-
GWHAAZE00000002exon2116176821161914-
GWHAAZE00000002exon2116254821162683-
GWHAAZE00000002exon2116277721162874-
GWHAAZE00000002exon2116387921163956-
GWHAAZE00000002exon2116404421164113-
GWHAAZE00000002exon2116514021165204-
GWHAAZE00000002exon2116531221165392-
GWHAAZE00000002exon2116606721166171-
GWHAAZE00000002exon2116625821166341-
GWHAAZE00000002exon2116727521167350-
GWHAAZE00000002exon2116746621167544-
GWHAAZE00000002exon2116798121168095-
GWHAAZE00000002exon2116822821168290-
GWHAAZE00000002CDS2116822821168290-
GWHAAZE00000002CDS2116798121168095-
GWHAAZE00000002CDS2116746621167544-
GWHAAZE00000002CDS2116727521167350-
GWHAAZE00000002CDS2116625821166341-
GWHAAZE00000002CDS2116606721166171-
GWHAAZE00000002CDS2116531221165392-
GWHAAZE00000002CDS2116514021165204-
GWHAAZE00000002CDS2116404421164113-
GWHAAZE00000002CDS2116387921163956-
GWHAAZE00000002CDS2116277721162874-
GWHAAZE00000002CDS2116254821162683-
GWHAAZE00000002CDS2116176821161914-
Transcript Sequence

Network for GWHGAAZE006211

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00923.20TAL_FSA753864.90E-49
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00616E2.2.1.2, talA, talB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Pentose phosphate pathwaymap00030

Gene Ontology

GO term OntologyName
GO:0006098biological_processpentose-phosphate shunt
GO:0005975biological_processcarbohydrate metabolic process
GO:0005737cellular_componentcytoplasm
GO:0004801molecular_functionsedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf148.102
SRR3591706second leaf60.659
SRR3591707mature leaf44.084
SRR3591708Shoot apex92.007
SRR3591709Stem77.125
SRR3591710White floral bud62.083
SRR3591711White flower28.242
SRR3591712Green floral bud111.805
SRR3591713Yellow flower30.517
SRP173429 SRR8316895Juvenile bud stage 70.222
SRR8316896Juvenile bud stage 103.415
SRR8316897Juvenile bud stage 71.283
SRR8316894Third green stage 51.726
SRR8316900Third green stage 168.700
SRR8316901Third green stage 144.412
SRR8316898Complete white stage 61.504
SRR8316899Complete white stage 179.650
SRR8316903Complete white stage 74.433
SRR8316902Silver flowering stage31.970
SRR8316904Silver flowering stage38.110
SRR8316905Silver flowering stage22.517
SRR8316906Gold flowering stage 70.495
SRR8316907Gold flowering stage 68.595
SRR8316908Gold flowering stage 85.877
SRP132670SRR6706286Control199.425
SRR6706287Light intensity 50%193.933
SRR6706288Light intensity 20%227.803
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1102.497
CNS0095593Slightly white alabastrum(diploid) 291.612
CNS0095594Slightly white alabastrum(diploid) 3102.721
CNS0095595Whole white alabastrum(diploid) 2101.831
CNS0095596Whole white alabastrum(diploid) 3132.029
CNS0095597Whole white alabastrum(diploid) 4126.063
CNS0095598Silvery flower (diploied) 188.989
CNS0095599Silvery flower (diploied) 290.612
CNS0095600Silvery flower (diploied) 3148.688
CNS0095601Golden flower (diploid) 195.813
CNS0095602Golden flower (diploid) 2106.811
CNS0095603Golden flower (diploid) 3101.100
CNS0095604Slightly white alabastrum(tetraploid) 1113.805
CNS0095605Slightly white alabastrum(tetraploid) 2100.418
CNS0095606Slightly white alabastrum(tetraploid) 3125.195
CNS0095607Whole white alabastrum(tetraploid) 169.157
CNS0095608Whole white alabastrum(tetraploid) 290.669
CNS0095609Whole white alabastrum(tetraploid) 3145.382
CNS0095610Silvery flower (tetraploid) 1153.242
CNS0095611Silvery flower (tetraploid) 2272.073
CNS0095612Silvery flower (tetraploid) 3154.471
CNS0095613Golden flower (tetraploid) 182.370
CNS0095614Golden flower (tetraploid) 2100.563
CNS0095615Golden flower (tetraploid) 350.405
CRA001975CRR073297Stem 1134.704
CRR073298Stem 2122.591
CRR073299Stem 3139.074
CRR073300Leaf 1204.848
CRR073301Leaf 2180.880
CRR073302Leaf 3240.252
CRR073303Juvenile bud 1320.395
CRR073304Juvenile bud 2258.187
CRR073305Juvenile bud 3315.938
CRR073306Third green 191.163
CRR073307Third green 279.810
CRR073308Third green 367.253
CRR073309Second white 190.740
CRR073310Second white 250.207
CRR073311Second white 342.551
CRR073312Silver flowering 132.543
CRR073313Silver flowering 236.424
CRR073314Silver flowering 329.621
CRR073315Gold flowering 161.114
CRR073316Gold flowering 287.374
CRR073317Gold flowering 351.417
CRR073318Tawny withering 179.733
CRR073319Tawny withering 270.601
CRR073320Tawny withering 377.415