Gene detail

Detail information of GWHGAAZE006309

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007209202.1	0	hypothetical protein PRUPE_ppa006484mg [Prunus persica]
Swissprot	tr\|P23922\|HBP1A_WHEAT	4E-63	Transcription factor HBP-1a
trEMBL	tr\|M5WAR1\|M5WAR1_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ10401.1}
TAIR10	AT2G35530.1	6E-113	basic region/leucine zipper transcription factor 16

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	22972570	22982151	+
GWHAAZE00000002	mRNA	22972570	22982151	+
GWHAAZE00000002	exon	22972570	22972680	+
GWHAAZE00000002	exon	22973066	22973122	+
GWHAAZE00000002	exon	22973214	22973288	+
GWHAAZE00000002	exon	22974177	22974290	+
GWHAAZE00000002	exon	22974689	22974778	+
GWHAAZE00000002	exon	22974867	22974926	+
GWHAAZE00000002	exon	22975412	22975581	+
GWHAAZE00000002	exon	22978347	22978404	+
GWHAAZE00000002	exon	22979552	22979594	+
GWHAAZE00000002	exon	22979687	22979955	+
GWHAAZE00000002	exon	22980507	22980584	+
GWHAAZE00000002	exon	22980693	22980818	+
GWHAAZE00000002	exon	22981607	22982151	+
GWHAAZE00000002	five_prime_UTR	22972570	22972605	+
GWHAAZE00000002	CDS	22972606	22972680	+
GWHAAZE00000002	CDS	22973066	22973122	+
GWHAAZE00000002	CDS	22973214	22973288	+
GWHAAZE00000002	CDS	22974177	22974290	+
GWHAAZE00000002	CDS	22974689	22974778	+
GWHAAZE00000002	CDS	22974867	22974926	+
GWHAAZE00000002	CDS	22975412	22975581	+
GWHAAZE00000002	CDS	22978347	22978404	+
GWHAAZE00000002	CDS	22979552	22979594	+
GWHAAZE00000002	CDS	22979687	22979955	+
GWHAAZE00000002	CDS	22980507	22980584	+
GWHAAZE00000002	CDS	22980693	22980818	+
GWHAAZE00000002	CDS	22981607	22981702	+
GWHAAZE00000002	three_prime_UTR	22981703	22982151	+

Transcript Sequence
>GWHTAAZE006317 TGCAGGATGGTTTTGAGAAGGTAGTTCAGTTGACTCATGGGCAGTAGTGAGATGGATAAACCCACTAAGGAGGCAAAAGAGCCAAAAGAGTCAAAAACTCCTACGTCACAGGAGCAGGCTTCTTCTACCAGTGCTGGCACAGTGAATCCAGACTGGTCCGGGTTTCAGGCATATTCTCCTATACCTCCACATGGTTTCATGGCTTCAAGTCCTCAAGCTCACCCCTACATGTGGGGAGTTCAGTTAGGCTGCATGCGATTCTGCCTCGTTGCGTTAAATTCTGGGAAAATGCCTAGTAAAATTTCAACTGAAGCCTTCTTGCATGTCTTCGTGTTTTTCTATGCTCTATTGCCTAAGCATCTTATGCCACCCTATGGTACTCCACCTCATCCGTATGTTGCTATGTATCCCCATGGTGGCATGTATGCTCATCCATCTATTCCTCCGGGATCTTATCCTTTCAGTCCCTTTGCGATGCCTTCGCCAAATGGTGTTGCTGAGGCTTCTGGAAATACTCCTGGCTGCACAGAAGTGGACGGTAAGTCGTCTGAGGGGAAGGAAAAATTGCCAATCAAAAGATCTAAGGGAAGTTTGGGCAGCTTAAGTATGATTACGGGCAAGAATAACGATCCTGGTAAAACATCAGGAGCATCTGCCAACGGAGTCTACTCCAAAAGTGCTGACAGCGGGAGTGAAGGTTCAAGTGAAGAAGGAAGTGATGCAGATTCTCAAAATGAGTCACAAATGAAGTCAGGAAGTAGGCAAGATTCTCTCGAAGCGGAAACATCTCAGAATGGCAACACTGCTCATGGTTCTCAGAATGGAGGACCGAACCAAACAATGTCCATCATGCCGATGCCAGTTACTGGTGCACCAGTAGGTGTTCCAGGTCCTACTACTAACTTAAATATTGGTATGGACTACTGGGGAGGTGCAACTTCATCCGCTATTCCGGCATTACGTGGGAAGTCACCTTCCACTCCAGTTGCTGGAGGAATGGTAACTACTGGATCACGGGAGAGCATGCAATCACAGCTTTGGCTACAGGATGAAAGGGAGCTTAAACGACAGAGAAGAAAGCAGTCCAACAGAGAATCTGCTCGTAGATCCAGGTTGCGCAAGCAGGCGGAATGTGATGAGCTGAGTCAGCGTGCTGAAGCTCTAAAAGAAGAAAATGCAACTCTTAGAGCAGAATTAAGTCGCATCAGAAGTGATTATGAGCAGATTCTTGCTCAAAATGCATCTCTTAAGGAGAGACTTGGCGAAGTTACTGGGGAAGAAAACCAACAAATAGGTAATGAAGGTCAAAAGACCGGGCAAACAGAACCCCTGCAGAGTGGTCAATGAAGTTCCACAGCTGCGTTGCTGCAGAATAATAATATATAGGGGGTTTAAAACTAACCAATTCGTAACCAAAAATTCTTATTTTACAAATAGTATGTAGTTCAAAATTCATTAAAAAATCTTACCTTTTTTAGTCATGGGATCTTTATTATCAGAAAAAGCCATCTATCTATCGGCTTCTGTTCGATCAATCCTTTAAGATAGAAGAATGGTGATTGGCACGTAGTGTGAAATGCGAGTCTCGCCCGTATTCTGTTACATTAAGGTAAGATTTTTCATTTGCCTTAAAACGCATGATGTATGTACTAAATATATGGCTTGATGAACAAGATACTACTATCGAGAGGATTATTAGTAGTTTAGTACTCTCAAATATGTTGTACGTCTTGTCTTGTGAAAATTGTACTTTGTGGCACGCTCACCGAGAATATTAAAGATTATGTGACTATTAG

Network for GWHGAAZE006309

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07777.12	MFMR	1	69	1.80E-15
PF07777.12	MFMR	106	136	8.10E-11
PF16596.6	MFMR_assoc	175	306	4.80E-51
PF00170.22	bZIP_1	339	401	7.60E-19

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	28.750
	SRR3591706	second leaf	15.590
	SRR3591707	mature leaf	21.712
	SRR3591708	Shoot apex	28.840
	SRR3591709	Stem	40.787
	SRR3591710	White floral bud	34.298
	SRR3591711	White flower	37.081
	SRR3591712	Green floral bud	28.235
	SRR3591713	Yellow flower	35.803
SRP173429	SRR8316895	Juvenile bud stage	15.923
	SRR8316896	Juvenile bud stage	19.321
	SRR8316897	Juvenile bud stage	10.799
	SRR8316894	Third green stage	8.022
	SRR8316900	Third green stage	20.174
	SRR8316901	Third green stage	21.245
	SRR8316898	Complete white stage	13.292
	SRR8316899	Complete white stage	37.221
	SRR8316903	Complete white stage	19.342
	SRR8316902	Silver flowering stage	12.439
	SRR8316904	Silver flowering stage	17.554
	SRR8316905	Silver flowering stage	7.765
	SRR8316906	Gold flowering stage	33.349
	SRR8316907	Gold flowering stage	25.405
	SRR8316908	Gold flowering stage	29.716
SRP132670	SRR6706286	Control	31.551
	SRR6706287	Light intensity 50%	30.496
	SRR6706288	Light intensity 20%	31.202
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	18.821
	CNS0095593	Slightly white alabastrum(diploid) 2	20.005
	CNS0095594	Slightly white alabastrum(diploid) 3	19.752
	CNS0095595	Whole white alabastrum(diploid) 2	17.160
	CNS0095596	Whole white alabastrum(diploid) 3	16.240
	CNS0095597	Whole white alabastrum(diploid) 4	15.670
	CNS0095598	Silvery flower (diploied) 1	32.095
	CNS0095599	Silvery flower (diploied) 2	28.167
	CNS0095600	Silvery flower (diploied) 3	32.454
	CNS0095601	Golden flower (diploid) 1	28.667
	CNS0095602	Golden flower (diploid) 2	37.567
	CNS0095603	Golden flower (diploid) 3	34.529
	CNS0095604	Slightly white alabastrum(tetraploid) 1	23.124
	CNS0095605	Slightly white alabastrum(tetraploid) 2	16.930
	CNS0095606	Slightly white alabastrum(tetraploid) 3	34.250
	CNS0095607	Whole white alabastrum(tetraploid) 1	16.058
	CNS0095608	Whole white alabastrum(tetraploid) 2	15.339
	CNS0095609	Whole white alabastrum(tetraploid) 3	23.997
	CNS0095610	Silvery flower (tetraploid) 1	33.111
	CNS0095611	Silvery flower (tetraploid) 2	33.699
	CNS0095612	Silvery flower (tetraploid) 3	27.237
	CNS0095613	Golden flower (tetraploid) 1	27.414
	CNS0095614	Golden flower (tetraploid) 2	33.563
	CNS0095615	Golden flower (tetraploid) 3	33.205
CRA001975	CRR073297	Stem 1	24.428
	CRR073298	Stem 2	23.120
	CRR073299	Stem 3	25.404
	CRR073300	Leaf 1	24.822
	CRR073301	Leaf 2	24.734
	CRR073302	Leaf 3	19.301
	CRR073303	Juvenile bud 1	22.084
	CRR073304	Juvenile bud 2	19.176
	CRR073305	Juvenile bud 3	20.336
	CRR073306	Third green 1	16.992
	CRR073307	Third green 2	17.363
	CRR073308	Third green 3	16.248
	CRR073309	Second white 1	11.732
	CRR073310	Second white 2	15.773
	CRR073311	Second white 3	13.053
	CRR073312	Silver flowering 1	11.438
	CRR073313	Silver flowering 2	9.977
	CRR073314	Silver flowering 3	8.166
	CRR073315	Gold flowering 1	14.048
	CRR073316	Gold flowering 2	20.817
	CRR073317	Gold flowering 3	12.388
	CRR073318	Tawny withering 1	26.421
	CRR073319	Tawny withering 2	23.534
	CRR073320	Tawny withering 3	25.073