Detail information of GWHGAAZE006347


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003612885.17.8324E-130hypothetical protein MTR_5g030130 [Medicago truncatula]
trEMBLtr|G7KDS6|G7KDS6_MEDTR3E-130PLATZ transcription factor family protein {ECO:0000313|EMBL:AES95843.1}
TAIR10AT4G17900.12E-82PLATZ transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2375050423752153-
GWHAAZE00000002mRNA2375050423752153-
GWHAAZE00000002exon2375050423750767-
GWHAAZE00000002exon2375123023751445-
GWHAAZE00000002exon2375168523751882-
GWHAAZE00000002exon2375215123752153-
GWHAAZE00000002CDS2375215123752153-
GWHAAZE00000002CDS2375168523751882-
GWHAAZE00000002CDS2375123023751445-
GWHAAZE00000002CDS2375050423750767-
Transcript Sequence

Network for GWHGAAZE006347

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04640.15PLATZ691404.70E-30
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPLATZ

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf142.006
SRR3591706second leaf34.483
SRR3591707mature leaf89.053
SRR3591708Shoot apex72.277
SRR3591709Stem170.409
SRR3591710White floral bud164.715
SRR3591711White flower227.683
SRR3591712Green floral bud143.159
SRR3591713Yellow flower202.153
SRP173429 SRR8316895Juvenile bud stage 84.431
SRR8316896Juvenile bud stage 105.173
SRR8316897Juvenile bud stage 73.153
SRR8316894Third green stage 34.216
SRR8316900Third green stage 99.321
SRR8316901Third green stage 98.811
SRR8316898Complete white stage 53.681
SRR8316899Complete white stage 180.619
SRR8316903Complete white stage 89.437
SRR8316902Silver flowering stage125.935
SRR8316904Silver flowering stage138.050
SRR8316905Silver flowering stage86.719
SRR8316906Gold flowering stage 348.848
SRR8316907Gold flowering stage 243.360
SRR8316908Gold flowering stage 323.326
SRP132670SRR6706286Control88.327
SRR6706287Light intensity 50%75.344
SRR6706288Light intensity 20%72.421
CNP0000432CNS0095592Slightly white alabastrum(diploid) 199.959
CNS0095593Slightly white alabastrum(diploid) 2117.783
CNS0095594Slightly white alabastrum(diploid) 3117.382
CNS0095595Whole white alabastrum(diploid) 278.384
CNS0095596Whole white alabastrum(diploid) 356.004
CNS0095597Whole white alabastrum(diploid) 466.751
CNS0095598Silvery flower (diploied) 195.945
CNS0095599Silvery flower (diploied) 2103.010
CNS0095600Silvery flower (diploied) 3151.240
CNS0095601Golden flower (diploid) 1115.109
CNS0095602Golden flower (diploid) 2143.934
CNS0095603Golden flower (diploid) 3141.732
CNS0095604Slightly white alabastrum(tetraploid) 143.861
CNS0095605Slightly white alabastrum(tetraploid) 248.072
CNS0095606Slightly white alabastrum(tetraploid) 369.933
CNS0095607Whole white alabastrum(tetraploid) 153.062
CNS0095608Whole white alabastrum(tetraploid) 240.937
CNS0095609Whole white alabastrum(tetraploid) 364.279
CNS0095610Silvery flower (tetraploid) 1223.451
CNS0095611Silvery flower (tetraploid) 2164.575
CNS0095612Silvery flower (tetraploid) 3110.356
CNS0095613Golden flower (tetraploid) 1140.953
CNS0095614Golden flower (tetraploid) 2176.942
CNS0095615Golden flower (tetraploid) 3198.720
CRA001975CRR073297Stem 1122.642
CRR073298Stem 2129.184
CRR073299Stem 3132.619
CRR073300Leaf 1220.400
CRR073301Leaf 2248.273
CRR073302Leaf 3175.137
CRR073303Juvenile bud 1245.288
CRR073304Juvenile bud 2230.590
CRR073305Juvenile bud 3302.841
CRR073306Third green 1199.635
CRR073307Third green 2138.137
CRR073308Third green 3162.365
CRR073309Second white 199.778
CRR073310Second white 2128.322
CRR073311Second white 390.135
CRR073312Silver flowering 175.520
CRR073313Silver flowering 272.245
CRR073314Silver flowering 377.186
CRR073315Gold flowering 131.430
CRR073316Gold flowering 251.635
CRR073317Gold flowering 360.758
CRR073318Tawny withering 1202.016
CRR073319Tawny withering 2205.815
CRR073320Tawny withering 3188.490