Detail information of GWHGAAZE006371


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002278359.20PREDICTED: pyruvate kinase isozyme G, chloroplastic isoform X1 [Vitis vinifera]
Swissprottr|Q40546|KPYG_TOBAC0Pyruvate kinase isozyme G, chloroplastic (Precursor)
trEMBLtr|F6HTA0|F6HTA0_VITVI0Pyruvate kinase {ECO:0000256|RuleBase:RU000504}
TAIR10AT1G32440.10plastidial pyruvate kinase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2441301924425577-
GWHAAZE00000002mRNA2441301924425577-
GWHAAZE00000002exon2442534124425577-
GWHAAZE00000002exon2442263824422913-
GWHAAZE00000002exon2442083524421000-
GWHAAZE00000002exon2441968424419818-
GWHAAZE00000002exon2441919124419301-
GWHAAZE00000002exon2441895724419045-
GWHAAZE00000002exon2441744224417504-
GWHAAZE00000002exon2441656624416741-
GWHAAZE00000002exon2441482724414929-
GWHAAZE00000002exon2441455624414704-
GWHAAZE00000002exon2441363624413744-
GWHAAZE00000002exon2441301924413389-
GWHAAZE00000002CDS2442534124425577-
GWHAAZE00000002CDS2442263824422913-
GWHAAZE00000002CDS2442083524421000-
GWHAAZE00000002CDS2441968424419818-
GWHAAZE00000002CDS2441919124419301-
GWHAAZE00000002CDS2441895724419045-
GWHAAZE00000002CDS2441744224417504-
GWHAAZE00000002CDS2441656624416741-
GWHAAZE00000002CDS2441482724414929-
GWHAAZE00000002CDS2441455624414704-
GWHAAZE00000002CDS2441363624413744-
GWHAAZE00000002CDS2441327624413389-
GWHAAZE00000002three_prime_UTR2441301924413275-
Transcript Sequence

Network for GWHGAAZE006371

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00224.22PK1044391.50E-117
PF02887.17PK_C4625533.10E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00873PK, pyk Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0003824molecular_functioncatalytic activity
GO:0004743molecular_functionpyruvate kinase activity
GO:0000287molecular_functionmagnesium ion binding
GO:0030955molecular_functionpotassium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.902
SRR3591706second leaf5.426
SRR3591707mature leaf4.076
SRR3591708Shoot apex1.761
SRR3591709Stem0.912
SRR3591710White floral bud0.912
SRR3591711White flower2.133
SRR3591712Green floral bud5.006
SRR3591713Yellow flower1.372
SRP173429 SRR8316895Juvenile bud stage 5.858
SRR8316896Juvenile bud stage 11.664
SRR8316897Juvenile bud stage 5.279
SRR8316894Third green stage 3.739
SRR8316900Third green stage 8.258
SRR8316901Third green stage 7.894
SRR8316898Complete white stage 1.332
SRR8316899Complete white stage 2.734
SRR8316903Complete white stage 1.095
SRR8316902Silver flowering stage0.920
SRR8316904Silver flowering stage0.975
SRR8316905Silver flowering stage0.330
SRR8316906Gold flowering stage 1.013
SRR8316907Gold flowering stage 0.583
SRR8316908Gold flowering stage 1.613
SRP132670SRR6706286Control3.424
SRR6706287Light intensity 50%3.050
SRR6706288Light intensity 20%3.160
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.300
CNS0095593Slightly white alabastrum(diploid) 26.173
CNS0095594Slightly white alabastrum(diploid) 311.119
CNS0095595Whole white alabastrum(diploid) 28.215
CNS0095596Whole white alabastrum(diploid) 39.986
CNS0095597Whole white alabastrum(diploid) 48.011
CNS0095598Silvery flower (diploied) 10.871
CNS0095599Silvery flower (diploied) 20.440
CNS0095600Silvery flower (diploied) 32.029
CNS0095601Golden flower (diploid) 10.713
CNS0095602Golden flower (diploid) 20.855
CNS0095603Golden flower (diploid) 30.681
CNS0095604Slightly white alabastrum(tetraploid) 115.614
CNS0095605Slightly white alabastrum(tetraploid) 216.494
CNS0095606Slightly white alabastrum(tetraploid) 32.371
CNS0095607Whole white alabastrum(tetraploid) 117.195
CNS0095608Whole white alabastrum(tetraploid) 216.596
CNS0095609Whole white alabastrum(tetraploid) 312.172
CNS0095610Silvery flower (tetraploid) 18.136
CNS0095611Silvery flower (tetraploid) 24.843
CNS0095612Silvery flower (tetraploid) 32.543
CNS0095613Golden flower (tetraploid) 12.507
CNS0095614Golden flower (tetraploid) 23.564
CNS0095615Golden flower (tetraploid) 30.843
CRA001975CRR073297Stem 14.377
CRR073298Stem 23.656
CRR073299Stem 32.552
CRR073300Leaf 14.732
CRR073301Leaf 24.349
CRR073302Leaf 33.473
CRR073303Juvenile bud 15.195
CRR073304Juvenile bud 24.434
CRR073305Juvenile bud 33.135
CRR073306Third green 11.521
CRR073307Third green 21.269
CRR073308Third green 31.693
CRR073309Second white 10.889
CRR073310Second white 22.281
CRR073311Second white 31.270
CRR073312Silver flowering 10.841
CRR073313Silver flowering 20.612
CRR073314Silver flowering 31.271
CRR073315Gold flowering 16.247
CRR073316Gold flowering 29.096
CRR073317Gold flowering 32.883
CRR073318Tawny withering 11.527
CRR073319Tawny withering 23.567
CRR073320Tawny withering 32.745