Detail information of GWHGAAZE006376


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002279150.12.9809E-148PREDICTED: two-component response regulator-like APRR2 [Vitis vinifera]
Swissprottr|Q6LA43|APRR2_ARATH1E-75Two-component response regulator-like APRR2
trEMBLtr|A5B243|A5B243_VITVI9E-148Putative uncharacterized protein {ECO:0000313|EMBL:CAN71929.1}
TAIR10AT4G18020.64E-66CheY-like two-component responsive regulator family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2457511724580488-
GWHAAZE00000002mRNA2457511724580488-
GWHAAZE00000002exon2458037424580488-
GWHAAZE00000002exon2457999824580065-
GWHAAZE00000002exon2457926424579803-
GWHAAZE00000002exon2457847724578617-
GWHAAZE00000002exon2457778724578059-
GWHAAZE00000002exon2457737124577439-
GWHAAZE00000002exon2457529124575427-
GWHAAZE00000002exon2457511724575153-
GWHAAZE00000002CDS2458037424580488-
GWHAAZE00000002CDS2457999824580065-
GWHAAZE00000002CDS2457926424579803-
GWHAAZE00000002CDS2457847724578617-
GWHAAZE00000002CDS2457778724578059-
GWHAAZE00000002CDS2457737124577439-
GWHAAZE00000002CDS2457529124575427-
GWHAAZE00000002CDS2457511724575153-
Transcript Sequence

Network for GWHGAAZE006376

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.32Myb_DNA-binding2422912.50E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-G2-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf99.375
SRR3591706second leaf33.531
SRR3591707mature leaf28.350
SRR3591708Shoot apex67.256
SRR3591709Stem105.398
SRR3591710White floral bud24.831
SRR3591711White flower29.802
SRR3591712Green floral bud8.942
SRR3591713Yellow flower6.720
SRP173429 SRR8316895Juvenile bud stage 20.006
SRR8316896Juvenile bud stage 19.528
SRR8316897Juvenile bud stage 8.005
SRR8316894Third green stage 6.526
SRR8316900Third green stage 9.254
SRR8316901Third green stage 9.389
SRR8316898Complete white stage 1.674
SRR8316899Complete white stage 17.662
SRR8316903Complete white stage 9.548
SRR8316902Silver flowering stage1.393
SRR8316904Silver flowering stage3.053
SRR8316905Silver flowering stage0.325
SRR8316906Gold flowering stage 1.916
SRR8316907Gold flowering stage 2.423
SRR8316908Gold flowering stage 5.050
SRP132670SRR6706286Control17.029
SRR6706287Light intensity 50%14.756
SRR6706288Light intensity 20%12.228
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.571
CNS0095593Slightly white alabastrum(diploid) 213.477
CNS0095594Slightly white alabastrum(diploid) 311.303
CNS0095595Whole white alabastrum(diploid) 217.003
CNS0095596Whole white alabastrum(diploid) 34.952
CNS0095597Whole white alabastrum(diploid) 410.181
CNS0095598Silvery flower (diploied) 170.452
CNS0095599Silvery flower (diploied) 249.310
CNS0095600Silvery flower (diploied) 312.967
CNS0095601Golden flower (diploid) 156.404
CNS0095602Golden flower (diploid) 236.049
CNS0095603Golden flower (diploid) 337.834
CNS0095604Slightly white alabastrum(tetraploid) 122.579
CNS0095605Slightly white alabastrum(tetraploid) 217.749
CNS0095606Slightly white alabastrum(tetraploid) 339.388
CNS0095607Whole white alabastrum(tetraploid) 119.329
CNS0095608Whole white alabastrum(tetraploid) 28.292
CNS0095609Whole white alabastrum(tetraploid) 312.879
CNS0095610Silvery flower (tetraploid) 112.542
CNS0095611Silvery flower (tetraploid) 215.861
CNS0095612Silvery flower (tetraploid) 312.322
CNS0095613Golden flower (tetraploid) 15.150
CNS0095614Golden flower (tetraploid) 224.734
CNS0095615Golden flower (tetraploid) 36.782
CRA001975CRR073297Stem 138.052
CRR073298Stem 230.398
CRR073299Stem 326.693
CRR073300Leaf 122.026
CRR073301Leaf 224.631
CRR073302Leaf 315.286
CRR073303Juvenile bud 110.277
CRR073304Juvenile bud 26.296
CRR073305Juvenile bud 315.806
CRR073306Third green 12.061
CRR073307Third green 22.547
CRR073308Third green 39.744
CRR073309Second white 10.891
CRR073310Second white 20.847
CRR073311Second white 31.511
CRR073312Silver flowering 10.037
CRR073313Silver flowering 21.458
CRR073314Silver flowering 30.999
CRR073315Gold flowering 113.577
CRR073316Gold flowering 221.255
CRR073317Gold flowering 312.033
CRR073318Tawny withering 183.474
CRR073319Tawny withering 257.651
CRR073320Tawny withering 376.072