Detail information of GWHGAAZE006528


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011086174.10PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like [Sesamum indicum]
Swissprottr|Q8RWU4|ATML1_ARATH0Homeobox-leucine zipper protein MERISTEM L1
trEMBLtr|A0A022QKL8|A0A022QKL8_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU27818.1}
TAIR10AT4G21750.20Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2719359727197937-
GWHAAZE00000002mRNA2719359727197937-
GWHAAZE00000002exon2719359727193962-
GWHAAZE00000002exon2719406727194162-
GWHAAZE00000002exon2719466627194937-
GWHAAZE00000002exon2719539227195566-
GWHAAZE00000002exon2719566427195864-
GWHAAZE00000002exon2719594727196048-
GWHAAZE00000002exon2719620027196631-
GWHAAZE00000002exon2719672227196910-
GWHAAZE00000002exon2719737027197487-
GWHAAZE00000002exon2719771127197937-
GWHAAZE00000002CDS2719771127197937-
GWHAAZE00000002CDS2719737027197487-
GWHAAZE00000002CDS2719672227196910-
GWHAAZE00000002CDS2719620027196631-
GWHAAZE00000002CDS2719594727196048-
GWHAAZE00000002CDS2719566427195864-
GWHAAZE00000002CDS2719539227195566-
GWHAAZE00000002CDS2719466627194937-
GWHAAZE00000002CDS2719406727194162-
GWHAAZE00000002CDS2719359727193962-
Transcript Sequence

Network for GWHGAAZE006528

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00046.30Homeodomain601154.90E-16
PF01852.20START2474661.50E-60
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyHB-HD-ZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008289molecular_functionlipid binding
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.831
SRR3591706second leaf11.616
SRR3591707mature leaf12.821
SRR3591708Shoot apex46.170
SRR3591709Stem1.714
SRR3591710White floral bud9.694
SRR3591711White flower9.701
SRR3591712Green floral bud17.868
SRR3591713Yellow flower6.130
SRP173429 SRR8316895Juvenile bud stage 17.768
SRR8316896Juvenile bud stage 22.074
SRR8316897Juvenile bud stage 11.372
SRR8316894Third green stage 9.824
SRR8316900Third green stage 19.398
SRR8316901Third green stage 23.121
SRR8316898Complete white stage 2.414
SRR8316899Complete white stage 17.517
SRR8316903Complete white stage 4.847
SRR8316902Silver flowering stage1.717
SRR8316904Silver flowering stage2.105
SRR8316905Silver flowering stage0.977
SRR8316906Gold flowering stage 4.455
SRR8316907Gold flowering stage 3.585
SRR8316908Gold flowering stage 3.774
SRP132670SRR6706286Control24.396
SRR6706287Light intensity 50%24.001
SRR6706288Light intensity 20%27.167
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.806
CNS0095593Slightly white alabastrum(diploid) 26.190
CNS0095594Slightly white alabastrum(diploid) 38.055
CNS0095595Whole white alabastrum(diploid) 25.269
CNS0095596Whole white alabastrum(diploid) 33.659
CNS0095597Whole white alabastrum(diploid) 42.752
CNS0095598Silvery flower (diploied) 112.026
CNS0095599Silvery flower (diploied) 26.556
CNS0095600Silvery flower (diploied) 38.761
CNS0095601Golden flower (diploid) 16.061
CNS0095602Golden flower (diploid) 29.359
CNS0095603Golden flower (diploid) 39.883
CNS0095604Slightly white alabastrum(tetraploid) 113.613
CNS0095605Slightly white alabastrum(tetraploid) 210.016
CNS0095606Slightly white alabastrum(tetraploid) 338.546
CNS0095607Whole white alabastrum(tetraploid) 12.845
CNS0095608Whole white alabastrum(tetraploid) 21.574
CNS0095609Whole white alabastrum(tetraploid) 320.662
CNS0095610Silvery flower (tetraploid) 19.209
CNS0095611Silvery flower (tetraploid) 211.274
CNS0095612Silvery flower (tetraploid) 37.701
CNS0095613Golden flower (tetraploid) 15.807
CNS0095614Golden flower (tetraploid) 28.838
CNS0095615Golden flower (tetraploid) 35.591
CRA001975CRR073297Stem 142.823
CRR073298Stem 237.600
CRR073299Stem 331.462
CRR073300Leaf 135.744
CRR073301Leaf 237.598
CRR073302Leaf 327.783
CRR073303Juvenile bud 113.833
CRR073304Juvenile bud 215.893
CRR073305Juvenile bud 317.658
CRR073306Third green 13.098
CRR073307Third green 21.634
CRR073308Third green 33.904
CRR073309Second white 11.784
CRR073310Second white 22.707
CRR073311Second white 31.929
CRR073312Silver flowering 11.049
CRR073313Silver flowering 21.619
CRR073314Silver flowering 31.470
CRR073315Gold flowering 122.093
CRR073316Gold flowering 214.179
CRR073317Gold flowering 315.556
CRR073318Tawny withering 12.670
CRR073319Tawny withering 21.877
CRR073320Tawny withering 31.229