Detail information of GWHGAAZE006530


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002267126.13.0505E-141PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Vitis vinifera]
Swissprottr|Q9SYB5|OST3B_ARATH8E-122Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B (Precursor)
trEMBLtr|A5B513|A5B513_VITVI1E-141Putative uncharacterized protein {ECO:0000313|EMBL:CAN74174.1}
TAIR10AT1G61790.16E-94Oligosaccharyltransferase complex/magnesium transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2725050927253066-
GWHAAZE00000002mRNA2725050927253066-
GWHAAZE00000002exon2725050927250748-
GWHAAZE00000002exon2725085327251191-
GWHAAZE00000002exon2725269827253066-
GWHAAZE00000002CDS2725269827253066-
GWHAAZE00000002CDS2725085327251191-
GWHAAZE00000002CDS2725050927250748-
Transcript Sequence

Network for GWHGAAZE006530

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04756.14OST3_OST6422353.90E-40
PF04756.14OST3_OST62363041.10E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12669OST3, OST6 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf85.877
SRR3591706second leaf46.473
SRR3591707mature leaf31.949
SRR3591708Shoot apex64.157
SRR3591709Stem58.658
SRR3591710White floral bud66.529
SRR3591711White flower72.355
SRR3591712Green floral bud97.231
SRR3591713Yellow flower47.424
SRP173429 SRR8316895Juvenile bud stage 51.108
SRR8316896Juvenile bud stage 61.140
SRR8316897Juvenile bud stage 28.780
SRR8316894Third green stage 27.401
SRR8316900Third green stage 94.962
SRR8316901Third green stage 85.487
SRR8316898Complete white stage 33.756
SRR8316899Complete white stage 102.511
SRR8316903Complete white stage 60.674
SRR8316902Silver flowering stage38.372
SRR8316904Silver flowering stage47.202
SRR8316905Silver flowering stage24.330
SRR8316906Gold flowering stage 57.107
SRR8316907Gold flowering stage 61.930
SRR8316908Gold flowering stage 66.499
SRP132670SRR6706286Control136.211
SRR6706287Light intensity 50%127.607
SRR6706288Light intensity 20%133.582
CNP0000432CNS0095592Slightly white alabastrum(diploid) 179.839
CNS0095593Slightly white alabastrum(diploid) 274.817
CNS0095594Slightly white alabastrum(diploid) 359.745
CNS0095595Whole white alabastrum(diploid) 264.601
CNS0095596Whole white alabastrum(diploid) 368.860
CNS0095597Whole white alabastrum(diploid) 461.866
CNS0095598Silvery flower (diploied) 157.989
CNS0095599Silvery flower (diploied) 254.036
CNS0095600Silvery flower (diploied) 370.322
CNS0095601Golden flower (diploid) 142.450
CNS0095602Golden flower (diploid) 274.692
CNS0095603Golden flower (diploid) 368.394
CNS0095604Slightly white alabastrum(tetraploid) 155.896
CNS0095605Slightly white alabastrum(tetraploid) 250.999
CNS0095606Slightly white alabastrum(tetraploid) 395.370
CNS0095607Whole white alabastrum(tetraploid) 144.686
CNS0095608Whole white alabastrum(tetraploid) 242.857
CNS0095609Whole white alabastrum(tetraploid) 372.197
CNS0095610Silvery flower (tetraploid) 150.309
CNS0095611Silvery flower (tetraploid) 253.490
CNS0095612Silvery flower (tetraploid) 352.507
CNS0095613Golden flower (tetraploid) 125.707
CNS0095614Golden flower (tetraploid) 249.645
CNS0095615Golden flower (tetraploid) 334.665
CRA001975CRR073297Stem 198.625
CRR073298Stem 295.973
CRR073299Stem 3121.178
CRR073300Leaf 199.251
CRR073301Leaf 2113.999
CRR073302Leaf 3120.559
CRR073303Juvenile bud 1119.785
CRR073304Juvenile bud 2131.739
CRR073305Juvenile bud 3144.333
CRR073306Third green 166.977
CRR073307Third green 260.357
CRR073308Third green 363.606
CRR073309Second white 158.020
CRR073310Second white 235.189
CRR073311Second white 337.274
CRR073312Silver flowering 149.880
CRR073313Silver flowering 257.089
CRR073314Silver flowering 351.276
CRR073315Gold flowering 171.469
CRR073316Gold flowering 298.933
CRR073317Gold flowering 397.053
CRR073318Tawny withering 1122.981
CRR073319Tawny withering 2109.622
CRR073320Tawny withering 3122.321