Detail information of GWHGAAZE006700


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277472.10PREDICTED: F-box/kelch-repeat protein At1g30090 [Vitis vinifera]
Swissprottr|Q9C6Z0|FBK17_ARATH0F-box/kelch-repeat protein At1g30090
trEMBLtr|A5BWU1|A5BWU1_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN75078.1}
TAIR10AT1G30090.19E-161Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3037345730374665+
GWHAAZE00000002mRNA3037345730374665+
GWHAAZE00000002exon3037345730374665+
GWHAAZE00000002CDS3037345730374665+
Transcript Sequence

Network for GWHGAAZE006700

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box53932.30E-06
PF01344.26Kelch_11952416.10E-10
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.507
SRR3591706second leaf7.073
SRR3591707mature leaf10.265
SRR3591708Shoot apex11.924
SRR3591709Stem16.445
SRR3591710White floral bud17.737
SRR3591711White flower18.164
SRR3591712Green floral bud10.265
SRR3591713Yellow flower17.223
SRP173429 SRR8316895Juvenile bud stage 8.405
SRR8316896Juvenile bud stage 15.594
SRR8316897Juvenile bud stage 6.249
SRR8316894Third green stage 3.574
SRR8316900Third green stage 9.144
SRR8316901Third green stage 8.788
SRR8316898Complete white stage 6.256
SRR8316899Complete white stage 15.865
SRR8316903Complete white stage 11.489
SRR8316902Silver flowering stage6.788
SRR8316904Silver flowering stage10.281
SRR8316905Silver flowering stage5.030
SRR8316906Gold flowering stage 12.824
SRR8316907Gold flowering stage 15.013
SRR8316908Gold flowering stage 16.460
SRP132670SRR6706286Control7.010
SRR6706287Light intensity 50%7.487
SRR6706288Light intensity 20%8.492
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.881
CNS0095593Slightly white alabastrum(diploid) 27.663
CNS0095594Slightly white alabastrum(diploid) 35.550
CNS0095595Whole white alabastrum(diploid) 27.298
CNS0095596Whole white alabastrum(diploid) 34.782
CNS0095597Whole white alabastrum(diploid) 46.791
CNS0095598Silvery flower (diploied) 114.888
CNS0095599Silvery flower (diploied) 216.857
CNS0095600Silvery flower (diploied) 319.598
CNS0095601Golden flower (diploid) 113.399
CNS0095602Golden flower (diploid) 220.887
CNS0095603Golden flower (diploid) 321.003
CNS0095604Slightly white alabastrum(tetraploid) 15.032
CNS0095605Slightly white alabastrum(tetraploid) 25.530
CNS0095606Slightly white alabastrum(tetraploid) 312.097
CNS0095607Whole white alabastrum(tetraploid) 14.393
CNS0095608Whole white alabastrum(tetraploid) 25.832
CNS0095609Whole white alabastrum(tetraploid) 35.310
CNS0095610Silvery flower (tetraploid) 114.770
CNS0095611Silvery flower (tetraploid) 212.437
CNS0095612Silvery flower (tetraploid) 319.795
CNS0095613Golden flower (tetraploid) 113.059
CNS0095614Golden flower (tetraploid) 219.337
CNS0095615Golden flower (tetraploid) 324.161
CRA001975CRR073297Stem 113.034
CRR073298Stem 214.690
CRR073299Stem 314.047
CRR073300Leaf 116.118
CRR073301Leaf 217.387
CRR073302Leaf 310.867
CRR073303Juvenile bud 112.060
CRR073304Juvenile bud 215.236
CRR073305Juvenile bud 323.724
CRR073306Third green 114.009
CRR073307Third green 214.750
CRR073308Third green 318.231
CRR073309Second white 113.449
CRR073310Second white 214.763
CRR073311Second white 315.948
CRR073312Silver flowering 122.188
CRR073313Silver flowering 217.281
CRR073314Silver flowering 316.437
CRR073315Gold flowering 18.615
CRR073316Gold flowering 216.840
CRR073317Gold flowering 318.542
CRR073318Tawny withering 118.358
CRR073319Tawny withering 220.442
CRR073320Tawny withering 316.041