Detail information of GWHGAAZE006707


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011096561.13.8886E-124PREDICTED: calcyclin-binding protein-like [Sesamum indicum]
trEMBLtr|D7TK67|D7TK67_VITVI6E-123Putative uncharacterized protein {ECO:0000313|EMBL:CBI30889.3}
TAIR10AT1G30070.12E-85SGS domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3055051530557365+
GWHAAZE00000002mRNA3055051530557365+
GWHAAZE00000002exon3055051530550625+
GWHAAZE00000002exon3055537030555510+
GWHAAZE00000002exon3055661330556852+
GWHAAZE00000002exon3055695130557010+
GWHAAZE00000002exon3055726130557365+
GWHAAZE00000002CDS3055051530550625+
GWHAAZE00000002CDS3055537030555510+
GWHAAZE00000002CDS3055661330556852+
GWHAAZE00000002CDS3055695130557010+
GWHAAZE00000002CDS3055726130557365+
Transcript Sequence

Network for GWHGAAZE006707

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09032.12Siah-Interact_N3525.40E-07
PF04969.17CS731493.90E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04507CACYBP, SIP Wnt signaling pathway map04310

Gene Ontology

GO term OntologyName
GO:0015631molecular_functiontubulin binding
GO:0031625molecular_functionubiquitin protein ligase binding
GO:0044548molecular_functionS100 protein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf53.088
SRR3591706second leaf25.374
SRR3591707mature leaf31.690
SRR3591708Shoot apex69.873
SRR3591709Stem46.149
SRR3591710White floral bud30.295
SRR3591711White flower39.401
SRR3591712Green floral bud54.022
SRR3591713Yellow flower27.560
SRP173429 SRR8316895Juvenile bud stage 56.121
SRR8316896Juvenile bud stage 103.354
SRR8316897Juvenile bud stage 50.939
SRR8316894Third green stage 21.657
SRR8316900Third green stage 71.507
SRR8316901Third green stage 58.645
SRR8316898Complete white stage 7.897
SRR8316899Complete white stage 47.464
SRR8316903Complete white stage 14.277
SRR8316902Silver flowering stage9.531
SRR8316904Silver flowering stage5.881
SRR8316905Silver flowering stage4.325
SRR8316906Gold flowering stage 20.963
SRR8316907Gold flowering stage 15.206
SRR8316908Gold flowering stage 12.854
SRP132670SRR6706286Control34.705
SRR6706287Light intensity 50%37.723
SRR6706288Light intensity 20%40.997
CNP0000432CNS0095592Slightly white alabastrum(diploid) 181.034
CNS0095593Slightly white alabastrum(diploid) 270.657
CNS0095594Slightly white alabastrum(diploid) 388.778
CNS0095595Whole white alabastrum(diploid) 265.308
CNS0095596Whole white alabastrum(diploid) 359.302
CNS0095597Whole white alabastrum(diploid) 450.720
CNS0095598Silvery flower (diploied) 171.383
CNS0095599Silvery flower (diploied) 2117.635
CNS0095600Silvery flower (diploied) 357.678
CNS0095601Golden flower (diploid) 1169.871
CNS0095602Golden flower (diploid) 280.805
CNS0095603Golden flower (diploid) 379.088
CNS0095604Slightly white alabastrum(tetraploid) 181.699
CNS0095605Slightly white alabastrum(tetraploid) 277.408
CNS0095606Slightly white alabastrum(tetraploid) 393.852
CNS0095607Whole white alabastrum(tetraploid) 141.984
CNS0095608Whole white alabastrum(tetraploid) 237.398
CNS0095609Whole white alabastrum(tetraploid) 374.589
CNS0095610Silvery flower (tetraploid) 146.834
CNS0095611Silvery flower (tetraploid) 266.517
CNS0095612Silvery flower (tetraploid) 340.288
CNS0095613Golden flower (tetraploid) 132.446
CNS0095614Golden flower (tetraploid) 250.369
CNS0095615Golden flower (tetraploid) 310.844
CRA001975CRR073297Stem 135.714
CRR073298Stem 232.453
CRR073299Stem 332.999
CRR073300Leaf 127.663
CRR073301Leaf 226.374
CRR073302Leaf 329.763
CRR073303Juvenile bud 128.497
CRR073304Juvenile bud 230.463
CRR073305Juvenile bud 323.717
CRR073306Third green 15.142
CRR073307Third green 23.279
CRR073308Third green 34.683
CRR073309Second white 15.645
CRR073310Second white 27.734
CRR073311Second white 33.082
CRR073312Silver flowering 11.492
CRR073313Silver flowering 22.687
CRR073314Silver flowering 31.198
CRR073315Gold flowering 117.375
CRR073316Gold flowering 222.529
CRR073317Gold flowering 312.283
CRR073318Tawny withering 131.263
CRR073319Tawny withering 230.989
CRR073320Tawny withering 325.248