Gene detail

Detail information of GWHGAAZE006791

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AET97663.1	1.8623E-120	TCP transcription factor [Camellia sinensis]
Swissprot	tr\|Q93V43\|TCP2_ARATH	2E-84	Transcription factor TCP2
trEMBL	tr\|J7F3K5\|J7F3K5_CAMSI	7E-121	TCP transcription factor {ECO:0000313\|EMBL:AET97663.1}
TAIR10	AT4G18390.2	1E-49	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	32095524	32096627	-
GWHAAZE00000002	mRNA	32095524	32096627	-
GWHAAZE00000002	exon	32096384	32096627	-
GWHAAZE00000002	exon	32096130	32096317	-
GWHAAZE00000002	exon	32095524	32096054	-
GWHAAZE00000002	CDS	32096384	32096627	-
GWHAAZE00000002	CDS	32096130	32096317	-
GWHAAZE00000002	CDS	32095524	32096054	-

Transcript Sequence
>GWHTAAZE006799 TGGCCATCATCTCGTATTGTTAGGGTTTCACGGGCTTCAGGTGGAAAAGACCGCCACAGTAAAGTCTGGACCTCGAAAGGACTAAGGGACCGCCGTGTTCGTCTCTCGGTGACCACGGCGATCCAGTTTTATGATCTTCAAGATCGGCTCGGATATGATCAACCCAGTAAAGCCGTGGAGTGGTTGCTTAAGGCGGCGGCTAGTTCCATAGCCGAGCTTCCATCTCTCAACACTTCATTTCCAGAAGTTGAATTCAATGACGAACCAAATCATCAACCCCAACAACAGAATGTTTCATTGTCGAAATCTGCTTGTAGTAGTACTTCAGAGACGAGTAAAGGATCTGCCAGTCTCTCACTTTCAAGGTCCGAAAGCCGAATGAAAGCCCGAGAGCGGGCAAGGGGAAGGGCAGCAGAGAAAGAAAAAGAGAAGGGTATAAACACAGTTGGAAACAGTACTACAACTCCTAATGGTTCATCTCACCAAAACCCTCAAAACCAACCGCCTCGGCACTGGCCTTCTTCAACTCCAATGGATTATTTCTCCACCGGACTTGTTAACCCGTCCTCATCAAGAACCCATTCCTCCTGGGGAAATACAATCTCACAGTTTAATGTTAATGGAGATCAAAATCAATTCTCTTTCATCCAGGAGAATCTCGTCCCAATAGTGTCTTCTAGTGCAGCAACCGGGGGTGACTATAACCTTAACTTTTCAATCTCTTCGGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTTGCCGTCCTTTTTGCCTCGTCACCTTCAAAGGTTCTCTCCAATAGACGGATCTAACATACCCTTCTTCATCGGGACGGCAGCCCCAAATGCTGTACCCGTGGAGAATCACCACCATCTTTATCCTCCTGGAAGTTTACAGCTGTGCTATGGCGATGGTGGCCAGCATTCAGACCAGAAAGGAAAAGGAAAGAACTGA

Network for GWHGAAZE006791

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03634.14	TCP	14	143	7.90E-35

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	TCP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	12.851
	SRR3591706	second leaf	39.303
	SRR3591707	mature leaf	18.060
	SRR3591708	Shoot apex	49.298
	SRR3591709	Stem	21.918
	SRR3591710	White floral bud	24.839
	SRR3591711	White flower	36.408
	SRR3591712	Green floral bud	94.040
	SRR3591713	Yellow flower	45.721
SRP173429	SRR8316895	Juvenile bud stage	25.243
	SRR8316896	Juvenile bud stage	26.998
	SRR8316897	Juvenile bud stage	16.530
	SRR8316894	Third green stage	24.228
	SRR8316900	Third green stage	85.393
	SRR8316901	Third green stage	72.452
	SRR8316898	Complete white stage	11.366
	SRR8316899	Complete white stage	53.139
	SRR8316903	Complete white stage	18.552
	SRR8316902	Silver flowering stage	9.914
	SRR8316904	Silver flowering stage	14.665
	SRR8316905	Silver flowering stage	7.645
	SRR8316906	Gold flowering stage	32.403
	SRR8316907	Gold flowering stage	26.535
	SRR8316908	Gold flowering stage	27.408
SRP132670	SRR6706286	Control	90.512
	SRR6706287	Light intensity 50%	92.025
	SRR6706288	Light intensity 20%	102.136
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	21.181
	CNS0095593	Slightly white alabastrum(diploid) 2	20.329
	CNS0095594	Slightly white alabastrum(diploid) 3	13.697
	CNS0095595	Whole white alabastrum(diploid) 2	22.219
	CNS0095596	Whole white alabastrum(diploid) 3	33.526
	CNS0095597	Whole white alabastrum(diploid) 4	18.305
	CNS0095598	Silvery flower (diploied) 1	11.837
	CNS0095599	Silvery flower (diploied) 2	6.831
	CNS0095600	Silvery flower (diploied) 3	24.658
	CNS0095601	Golden flower (diploid) 1	9.437
	CNS0095602	Golden flower (diploid) 2	26.897
	CNS0095603	Golden flower (diploid) 3	27.635
	CNS0095604	Slightly white alabastrum(tetraploid) 1	31.063
	CNS0095605	Slightly white alabastrum(tetraploid) 2	26.356
	CNS0095606	Slightly white alabastrum(tetraploid) 3	56.410
	CNS0095607	Whole white alabastrum(tetraploid) 1	9.926
	CNS0095608	Whole white alabastrum(tetraploid) 2	13.415
	CNS0095609	Whole white alabastrum(tetraploid) 3	56.792
	CNS0095610	Silvery flower (tetraploid) 1	17.168
	CNS0095611	Silvery flower (tetraploid) 2	18.539
	CNS0095612	Silvery flower (tetraploid) 3	7.333
	CNS0095613	Golden flower (tetraploid) 1	10.232
	CNS0095614	Golden flower (tetraploid) 2	20.876
	CNS0095615	Golden flower (tetraploid) 3	27.968
CRA001975	CRR073297	Stem 1	69.094
	CRR073298	Stem 2	63.090
	CRR073299	Stem 3	62.936
	CRR073300	Leaf 1	93.815
	CRR073301	Leaf 2	80.087
	CRR073302	Leaf 3	79.524
	CRR073303	Juvenile bud 1	65.801
	CRR073304	Juvenile bud 2	77.547
	CRR073305	Juvenile bud 3	57.355
	CRR073306	Third green 1	9.329
	CRR073307	Third green 2	6.247
	CRR073308	Third green 3	8.601
	CRR073309	Second white 1	7.462
	CRR073310	Second white 2	13.829
	CRR073311	Second white 3	11.889
	CRR073312	Silver flowering 1	13.981
	CRR073313	Silver flowering 2	16.587
	CRR073314	Silver flowering 3	16.210
	CRR073315	Gold flowering 1	17.333
	CRR073316	Gold flowering 2	20.420
	CRR073317	Gold flowering 3	14.021
	CRR073318	Tawny withering 1	19.421
	CRR073319	Tawny withering 2	14.428
	CRR073320	Tawny withering 3	14.904