Detail information of GWHGAAZE006794


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002267244.15.671E-162PREDICTED: p21-activated protein kinase-interacting protein 1-like [Vitis vinifera]
trEMBLtr|D7THM7|D7THM7_VITVI2E-162Putative uncharacterized protein {ECO:0000313|EMBL:CBI30543.3}
TAIR10AT1G65030.18E-110Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3214277832145237+
GWHAAZE00000002mRNA3214277832145237+
GWHAAZE00000002exon3214277832143431+
GWHAAZE00000002exon3214492332145237+
GWHAAZE00000002CDS3214277832143431+
GWHAAZE00000002CDS3214492332145237+
Transcript Sequence

Network for GWHGAAZE006794

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD4034670.026
PF00400.33WD40791130.029
PF00400.33WD402662860.048
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.030
SRR3591706second leaf14.040
SRR3591707mature leaf10.494
SRR3591708Shoot apex21.958
SRR3591709Stem13.536
SRR3591710White floral bud10.313
SRR3591711White flower24.575
SRR3591712Green floral bud19.668
SRR3591713Yellow flower18.130
SRP173429 SRR8316895Juvenile bud stage 13.320
SRR8316896Juvenile bud stage 18.883
SRR8316897Juvenile bud stage 10.068
SRR8316894Third green stage 7.466
SRR8316900Third green stage 29.850
SRR8316901Third green stage 22.902
SRR8316898Complete white stage 3.911
SRR8316899Complete white stage 22.342
SRR8316903Complete white stage 10.854
SRR8316902Silver flowering stage8.503
SRR8316904Silver flowering stage11.645
SRR8316905Silver flowering stage5.086
SRR8316906Gold flowering stage 12.841
SRR8316907Gold flowering stage 17.461
SRR8316908Gold flowering stage 17.436
SRP132670SRR6706286Control25.329
SRR6706287Light intensity 50%22.662
SRR6706288Light intensity 20%23.344
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.600
CNS0095593Slightly white alabastrum(diploid) 220.147
CNS0095594Slightly white alabastrum(diploid) 317.081
CNS0095595Whole white alabastrum(diploid) 213.791
CNS0095596Whole white alabastrum(diploid) 315.891
CNS0095597Whole white alabastrum(diploid) 412.725
CNS0095598Silvery flower (diploied) 119.053
CNS0095599Silvery flower (diploied) 214.686
CNS0095600Silvery flower (diploied) 318.396
CNS0095601Golden flower (diploid) 113.206
CNS0095602Golden flower (diploid) 214.693
CNS0095603Golden flower (diploid) 314.791
CNS0095604Slightly white alabastrum(tetraploid) 117.427
CNS0095605Slightly white alabastrum(tetraploid) 216.848
CNS0095606Slightly white alabastrum(tetraploid) 324.414
CNS0095607Whole white alabastrum(tetraploid) 18.333
CNS0095608Whole white alabastrum(tetraploid) 29.568
CNS0095609Whole white alabastrum(tetraploid) 320.137
CNS0095610Silvery flower (tetraploid) 119.258
CNS0095611Silvery flower (tetraploid) 214.792
CNS0095612Silvery flower (tetraploid) 39.949
CNS0095613Golden flower (tetraploid) 110.580
CNS0095614Golden flower (tetraploid) 218.649
CNS0095615Golden flower (tetraploid) 39.348
CRA001975CRR073297Stem 112.173
CRR073298Stem 212.102
CRR073299Stem 311.360
CRR073300Leaf 111.920
CRR073301Leaf 212.267
CRR073302Leaf 310.716
CRR073303Juvenile bud 117.384
CRR073304Juvenile bud 27.552
CRR073305Juvenile bud 316.957
CRR073306Third green 13.426
CRR073307Third green 25.356
CRR073308Third green 34.311
CRR073309Second white 111.254
CRR073310Second white 28.414
CRR073311Second white 36.085
CRR073312Silver flowering 14.839
CRR073313Silver flowering 26.368
CRR073314Silver flowering 34.936
CRR073315Gold flowering 18.057
CRR073316Gold flowering 212.411
CRR073317Gold flowering 310.441
CRR073318Tawny withering 114.286
CRR073319Tawny withering 215.030
CRR073320Tawny withering 311.943