Gene detail

Detail information of GWHGAAZE006840

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CAN63634.1	5.7297E-173	hypothetical protein VITISV_009388 [Vitis vinifera]
Swissprot	tr\|Q9C942\|CSE_ARATH	3E-51	Caffeoylshikimate esterase
trEMBL	tr\|A5BM71\|A5BM71_VITVI	2E-173	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN63634.1}
TAIR10	AT5G14980.1	2E-93	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	32994544	32995494	+
GWHAAZE00000002	mRNA	32994544	32995494	+
GWHAAZE00000002	exon	32994544	32995494	+
GWHAAZE00000002	CDS	32994544	32995494	+

Transcript Sequence
>GWHTAAZE006848 ATGGCTCATCCTATTCACCAAGCTAATGAAAACAGCCCTTATGGAGACCTCACTAGGGAAGACTTCTACAAGAAGCACCAAATACTCCACCAACAAAGCTTCATGTTAAACAACCAAAACATGAAAATATTTACCCAATCTTGGCGCCCTGGCTCGACCCCTCGGTTAAGAGGACTCATAGCCATGGTCCATGGCTATGCATCGGAAAGCAGCTGGCTCTTCGAACTAACGGGCGTAGCCTTGGCCAAAGCTGGTTTTTTCGTGTGTGCACTTGACCTCCAAGGCCACGGTTACTCCGAGGGCGTGCCCGGTCACATACCCAATATCCGACCCTTAGTTCGAGACTGCATCCAGTTTTTTGACCCGGCTCGAGCTAACCATCAACTTGTCCCGGCTTTCCTATACGGCGAGTCGCTAGGTGGGGCCATAGCGATACTTATAGCCCTACAACAAAGGAGTGAGTGGAAAGGCTTGATTCTTAGTGGAGCTATGTGTGGAGTTTCAAAGAAGATGAAGCCTGTCTGGCCCCTCGAGAAGCTACTTCTGGTCACAGCTTGTGTGGCAGGGCCCAAGTGGAGGGTACCCATGACTAAGCCTCTGGGAAGTGGGTCCTACAAGGAGGAGTGGAAGAGAAAGTTGGTGCGGAAGAGCCCAACCCGGCAGGCCCGCGGTAAGCCACCAGCCAGGACAGCATTGGAGCTTTTGAGGGTCTGTGAGTACATAAAGAGGCATAGTAATGAGCTTGACGTTCCTATGTTGGTGGTGCATGGTGGGGACGATAGGGTATGTGACCCAAAATCAGCTAGGGTTGTTTATGAGTCAGCGGCTAGTAAGGACAAGAGTTTGAAGATTTTTGAGGGCATGTGGCATCTCTTTATTGGTGAACCTAATGAATGCGTGGACCTAGTTTTCGGGACTATATTGTCATGGATAGGAGAGAGAGCTGACAAA

Network for GWHGAAZE006840

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12146.9	Hydrolase_4	57	297	2.80E-58

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01054	MGLL	Metabolic pathways	map01100
		Glycerolipid metabolism	map00561
		Regulation of lipolysis in adipocytes	map04923
		Retrograde endocannabinoid signaling	map04723
		Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.792
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.489
	SRR3591709	Stem	0.620
	SRR3591710	White floral bud	0.557
	SRR3591711	White flower	0.152
	SRR3591712	Green floral bud	0.340
	SRR3591713	Yellow flower	0.149
SRP173429	SRR8316895	Juvenile bud stage	0.066
	SRR8316896	Juvenile bud stage	0.175
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.107
	SRR8316900	Third green stage	0.637
	SRR8316901	Third green stage	0.248
	SRR8316898	Complete white stage	0.533
	SRR8316899	Complete white stage	0.861
	SRR8316903	Complete white stage	0.487
	SRR8316902	Silver flowering stage	0.060
	SRR8316904	Silver flowering stage	0.375
	SRR8316905	Silver flowering stage	0.036
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.527
	SRR6706287	Light intensity 50%	0.662
	SRR6706288	Light intensity 20%	0.525
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.120
	CNS0095594	Slightly white alabastrum(diploid) 3	0.375
	CNS0095595	Whole white alabastrum(diploid) 2	0.326
	CNS0095596	Whole white alabastrum(diploid) 3	0.288
	CNS0095597	Whole white alabastrum(diploid) 4	0.482
	CNS0095598	Silvery flower (diploied) 1	0.222
	CNS0095599	Silvery flower (diploied) 2	0.170
	CNS0095600	Silvery flower (diploied) 3	0.497
	CNS0095601	Golden flower (diploid) 1	0.310
	CNS0095602	Golden flower (diploid) 2	0.345
	CNS0095603	Golden flower (diploid) 3	0.253
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.279
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.504
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.145
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.052
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.365
	CNS0095610	Silvery flower (tetraploid) 1	0.056
	CNS0095611	Silvery flower (tetraploid) 2	0.434
	CNS0095612	Silvery flower (tetraploid) 3	0.108
	CNS0095613	Golden flower (tetraploid) 1	0.245
	CNS0095614	Golden flower (tetraploid) 2	0.074
	CNS0095615	Golden flower (tetraploid) 3	0.136
CRA001975	CRR073297	Stem 1	0.745
	CRR073298	Stem 2	0.314
	CRR073299	Stem 3	0.864
	CRR073300	Leaf 1	0.495
	CRR073301	Leaf 2	0.468
	CRR073302	Leaf 3	0.911
	CRR073303	Juvenile bud 1	0.407
	CRR073304	Juvenile bud 2	0.433
	CRR073305	Juvenile bud 3	0.576
	CRR073306	Third green 1	0.368
	CRR073307	Third green 2	0.266
	CRR073308	Third green 3	0.847
	CRR073309	Second white 1	0.051
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000