Detail information of GWHGAAZE006933


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009599283.17.19129E-73PREDICTED: uncharacterized protein LOC104094965 [Nicotiana tomentosiformis]
trEMBLtr|V4UCJ2|V4UCJ2_9ROSI2E-69Uncharacterized protein {ECO:0000313|EMBL:ESR61880.1}
TAIR10AT1G31040.19E-28PLATZ transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3438529334389405-
GWHAAZE00000002mRNA3438529334389405-
GWHAAZE00000002exon3438923234389405-
GWHAAZE00000002exon3438661434386688-
GWHAAZE00000002exon3438529334385631-
GWHAAZE00000002CDS3438923234389405-
GWHAAZE00000002CDS3438661434386688-
GWHAAZE00000002CDS3438529334385631-
Transcript Sequence

Network for GWHGAAZE006933

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04640.15PLATZ60845.90E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPLATZ

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud2.827
SRR3591711White flower2.872
SRR3591712Green floral bud0.913
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.443
SRR8316896Juvenile bud stage 1.423
SRR8316897Juvenile bud stage 0.134
SRR8316894Third green stage 0.978
SRR8316900Third green stage 1.335
SRR8316901Third green stage 1.578
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 3.188
SRR8316903Complete white stage 0.280
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.052
SRR6706287Light intensity 50%1.276
SRR6706288Light intensity 20%1.228
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.083
CNS0095593Slightly white alabastrum(diploid) 20.499
CNS0095594Slightly white alabastrum(diploid) 31.782
CNS0095595Whole white alabastrum(diploid) 21.929
CNS0095596Whole white alabastrum(diploid) 30.403
CNS0095597Whole white alabastrum(diploid) 40.262
CNS0095598Silvery flower (diploied) 15.718
CNS0095599Silvery flower (diploied) 28.110
CNS0095600Silvery flower (diploied) 30.815
CNS0095601Golden flower (diploid) 14.731
CNS0095602Golden flower (diploid) 21.443
CNS0095603Golden flower (diploid) 31.069
CNS0095604Slightly white alabastrum(tetraploid) 11.481
CNS0095605Slightly white alabastrum(tetraploid) 22.081
CNS0095606Slightly white alabastrum(tetraploid) 33.809
CNS0095607Whole white alabastrum(tetraploid) 11.520
CNS0095608Whole white alabastrum(tetraploid) 21.007
CNS0095609Whole white alabastrum(tetraploid) 31.751
CNS0095610Silvery flower (tetraploid) 10.175
CNS0095611Silvery flower (tetraploid) 21.055
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.452
CRR073298Stem 21.262
CRR073299Stem 30.668
CRR073300Leaf 11.822
CRR073301Leaf 20.886
CRR073302Leaf 30.870
CRR073303Juvenile bud 10.965
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 31.485
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000