Detail information of GWHGAAZE006935


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010276221.10PREDICTED: bifunctional purine biosynthesis protein purH [Nelumbo nucifera]
trEMBLtr|Q9FPL3|Q9FPL3_TOBAC0Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase {ECO:0000313|EMBL:AAG40879.1}
TAIR10AT2G35040.10AICARFT/IMPCHase bienzyme family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3443920334445368-
GWHAAZE00000002mRNA3443920334445368-
GWHAAZE00000002exon3444527334445368-
GWHAAZE00000002exon3444503034445132-
GWHAAZE00000002exon3444412234444255-
GWHAAZE00000002exon3444369234443872-
GWHAAZE00000002exon3444234134442495-
GWHAAZE00000002exon3444182634442035-
GWHAAZE00000002exon3444069234441039-
GWHAAZE00000002exon3444011334440239-
GWHAAZE00000002exon3443920334439605-
GWHAAZE00000002CDS3444527334445368-
GWHAAZE00000002CDS3444503034445132-
GWHAAZE00000002CDS3444412234444255-
GWHAAZE00000002CDS3444369234443872-
GWHAAZE00000002CDS3444234134442495-
GWHAAZE00000002CDS3444182634442035-
GWHAAZE00000002CDS3444069234441039-
GWHAAZE00000002CDS3444011334440239-
GWHAAZE00000002CDS3443945434439605-
GWHAAZE00000002three_prime_UTR3443920334439453-
Transcript Sequence

Network for GWHGAAZE006935

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02142.23MGS11031.10E-20
PF01808.19AICARFT_IMPCHas1094333.80E-115
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00602purH Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Purine metabolismmap00230
One carbon pool by folatemap00670

Gene Ontology

GO term OntologyName
GO:0006164biological_processpurine nucleotide biosynthetic process
GO:0003824molecular_functioncatalytic activity
GO:0003937molecular_functionIMP cyclohydrolase activity
GO:0004643molecular_functionphosphoribosylaminoimidazolecarboxamide formyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.706
SRR3591706second leaf21.351
SRR3591707mature leaf16.749
SRR3591708Shoot apex51.713
SRR3591709Stem21.632
SRR3591710White floral bud18.214
SRR3591711White flower22.395
SRR3591712Green floral bud39.561
SRR3591713Yellow flower11.525
SRP173429 SRR8316895Juvenile bud stage 31.962
SRR8316896Juvenile bud stage 38.175
SRR8316897Juvenile bud stage 21.817
SRR8316894Third green stage 15.374
SRR8316900Third green stage 50.802
SRR8316901Third green stage 38.610
SRR8316898Complete white stage 5.545
SRR8316899Complete white stage 36.829
SRR8316903Complete white stage 9.217
SRR8316902Silver flowering stage4.276
SRR8316904Silver flowering stage4.366
SRR8316905Silver flowering stage2.383
SRR8316906Gold flowering stage 7.683
SRR8316907Gold flowering stage 8.688
SRR8316908Gold flowering stage 10.232
SRP132670SRR6706286Control27.369
SRR6706287Light intensity 50%26.280
SRR6706288Light intensity 20%29.944
CNP0000432CNS0095592Slightly white alabastrum(diploid) 140.412
CNS0095593Slightly white alabastrum(diploid) 237.978
CNS0095594Slightly white alabastrum(diploid) 336.846
CNS0095595Whole white alabastrum(diploid) 232.887
CNS0095596Whole white alabastrum(diploid) 332.951
CNS0095597Whole white alabastrum(diploid) 427.237
CNS0095598Silvery flower (diploied) 141.549
CNS0095599Silvery flower (diploied) 235.035
CNS0095600Silvery flower (diploied) 320.167
CNS0095601Golden flower (diploid) 131.887
CNS0095602Golden flower (diploid) 223.551
CNS0095603Golden flower (diploid) 321.842
CNS0095604Slightly white alabastrum(tetraploid) 141.608
CNS0095605Slightly white alabastrum(tetraploid) 237.535
CNS0095606Slightly white alabastrum(tetraploid) 358.979
CNS0095607Whole white alabastrum(tetraploid) 122.123
CNS0095608Whole white alabastrum(tetraploid) 216.654
CNS0095609Whole white alabastrum(tetraploid) 342.655
CNS0095610Silvery flower (tetraploid) 121.861
CNS0095611Silvery flower (tetraploid) 232.872
CNS0095612Silvery flower (tetraploid) 315.390
CNS0095613Golden flower (tetraploid) 19.250
CNS0095614Golden flower (tetraploid) 217.333
CNS0095615Golden flower (tetraploid) 36.049
CRA001975CRR073297Stem 148.686
CRR073298Stem 238.053
CRR073299Stem 338.953
CRR073300Leaf 139.211
CRR073301Leaf 239.312
CRR073302Leaf 335.594
CRR073303Juvenile bud 136.967
CRR073304Juvenile bud 223.644
CRR073305Juvenile bud 338.461
CRR073306Third green 11.051
CRR073307Third green 21.263
CRR073308Third green 31.787
CRR073309Second white 15.481
CRR073310Second white 22.875
CRR073311Second white 33.438
CRR073312Silver flowering 12.552
CRR073313Silver flowering 22.428
CRR073314Silver flowering 32.171
CRR073315Gold flowering 123.960
CRR073316Gold flowering 231.840
CRR073317Gold flowering 321.489
CRR073318Tawny withering 131.126
CRR073319Tawny withering 230.524
CRR073320Tawny withering 335.864