Detail information of GWHGAAZE006973


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002520549.10Regulatory protein NPR1, putative [Ricinus communis]
Swissprottr|Q8L746|NPR3_ARATH0Regulatory protein NPR3
trEMBLtr|B9S3I0|B9S3I0_RICCO0Regulatory protein NPR1, putative {ECO:0000313|EMBL:EEF41835.1}
TAIR10AT5G45110.17E-177NPR1-like protein 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3546857235472931+
GWHAAZE00000002mRNA3546857235472931+
GWHAAZE00000002exon3546857235469129+
GWHAAZE00000002exon3547009935470858+
GWHAAZE00000002exon3547150235471687+
GWHAAZE00000002exon3547266635472931+
GWHAAZE00000002CDS3546857235469129+
GWHAAZE00000002CDS3547009935470858+
GWHAAZE00000002CDS3547150235471687+
GWHAAZE00000002CDS3547266635472931+
Transcript Sequence

Network for GWHGAAZE006973

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.32BTB631473.40E-12
PF11900.9DUF34202282773.50E-10
PF00023.31Ank3353600.01
PF12313.9NPR1_like_C3765751.10E-84
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF

KEGG pathway

KO Enzyme pathway mapID
K14508NPR1 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.819
SRR3591706second leaf19.155
SRR3591707mature leaf20.532
SRR3591708Shoot apex16.606
SRR3591709Stem27.840
SRR3591710White floral bud25.520
SRR3591711White flower43.400
SRR3591712Green floral bud24.293
SRR3591713Yellow flower44.877
SRP173429 SRR8316895Juvenile bud stage 27.396
SRR8316896Juvenile bud stage 35.662
SRR8316897Juvenile bud stage 13.036
SRR8316894Third green stage 9.118
SRR8316900Third green stage 24.323
SRR8316901Third green stage 30.875
SRR8316898Complete white stage 13.559
SRR8316899Complete white stage 40.669
SRR8316903Complete white stage 26.666
SRR8316902Silver flowering stage22.058
SRR8316904Silver flowering stage30.297
SRR8316905Silver flowering stage18.016
SRR8316906Gold flowering stage 53.660
SRR8316907Gold flowering stage 41.997
SRR8316908Gold flowering stage 44.190
SRP132670SRR6706286Control25.640
SRR6706287Light intensity 50%25.095
SRR6706288Light intensity 20%23.989
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.574
CNS0095593Slightly white alabastrum(diploid) 234.289
CNS0095594Slightly white alabastrum(diploid) 329.198
CNS0095595Whole white alabastrum(diploid) 224.104
CNS0095596Whole white alabastrum(diploid) 314.811
CNS0095597Whole white alabastrum(diploid) 419.495
CNS0095598Silvery flower (diploied) 130.962
CNS0095599Silvery flower (diploied) 235.726
CNS0095600Silvery flower (diploied) 340.768
CNS0095601Golden flower (diploid) 146.309
CNS0095602Golden flower (diploid) 254.768
CNS0095603Golden flower (diploid) 352.935
CNS0095604Slightly white alabastrum(tetraploid) 113.727
CNS0095605Slightly white alabastrum(tetraploid) 212.437
CNS0095606Slightly white alabastrum(tetraploid) 329.638
CNS0095607Whole white alabastrum(tetraploid) 110.897
CNS0095608Whole white alabastrum(tetraploid) 210.174
CNS0095609Whole white alabastrum(tetraploid) 317.825
CNS0095610Silvery flower (tetraploid) 128.976
CNS0095611Silvery flower (tetraploid) 224.772
CNS0095612Silvery flower (tetraploid) 319.079
CNS0095613Golden flower (tetraploid) 120.172
CNS0095614Golden flower (tetraploid) 228.623
CNS0095615Golden flower (tetraploid) 322.895
CRA001975CRR073297Stem 136.511
CRR073298Stem 233.215
CRR073299Stem 326.257
CRR073300Leaf 132.128
CRR073301Leaf 233.822
CRR073302Leaf 325.353
CRR073303Juvenile bud 129.600
CRR073304Juvenile bud 229.944
CRR073305Juvenile bud 336.010
CRR073306Third green 146.102
CRR073307Third green 237.827
CRR073308Third green 341.298
CRR073309Second white 131.842
CRR073310Second white 241.485
CRR073311Second white 336.743
CRR073312Silver flowering 133.099
CRR073313Silver flowering 227.154
CRR073314Silver flowering 325.207
CRR073315Gold flowering 127.998
CRR073316Gold flowering 242.940
CRR073317Gold flowering 320.462
CRR073318Tawny withering 139.779
CRR073319Tawny withering 271.780
CRR073320Tawny withering 339.273