Detail information of GWHGAAZE006984


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010654319.13.7122E-163PREDICTED: uncharacterized protein LOC100247068 [Vitis vinifera]
trEMBLtr|A0A061F073|A0A061F073_THECC2E-136RING/U-box superfamily protein {ECO:0000313|EMBL:EOY10715.1}
TAIR10AT5G18260.17E-27RING/U-box superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3562979435632824+
GWHAAZE00000002mRNA3562979435632824+
GWHAAZE00000002exon3562979435630232+
GWHAAZE00000002exon3563115835631198+
GWHAAZE00000002exon3563194335632824+
GWHAAZE00000002CDS3562979435630232+
GWHAAZE00000002CDS3563115835631198+
GWHAAZE00000002CDS3563194335632824+
Transcript Sequence

Network for GWHGAAZE006984

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.547
SRR3591706second leaf25.696
SRR3591707mature leaf22.096
SRR3591708Shoot apex39.291
SRR3591709Stem23.227
SRR3591710White floral bud19.236
SRR3591711White flower32.771
SRR3591712Green floral bud26.556
SRR3591713Yellow flower15.304
SRP173429 SRR8316895Juvenile bud stage 28.308
SRR8316896Juvenile bud stage 33.913
SRR8316897Juvenile bud stage 14.530
SRR8316894Third green stage 14.643
SRR8316900Third green stage 31.587
SRR8316901Third green stage 32.486
SRR8316898Complete white stage 4.417
SRR8316899Complete white stage 32.447
SRR8316903Complete white stage 10.012
SRR8316902Silver flowering stage2.051
SRR8316904Silver flowering stage5.254
SRR8316905Silver flowering stage2.243
SRR8316906Gold flowering stage 3.154
SRR8316907Gold flowering stage 4.086
SRR8316908Gold flowering stage 7.372
SRP132670SRR6706286Control42.113
SRR6706287Light intensity 50%38.465
SRR6706288Light intensity 20%39.185
CNP0000432CNS0095592Slightly white alabastrum(diploid) 134.600
CNS0095593Slightly white alabastrum(diploid) 228.282
CNS0095594Slightly white alabastrum(diploid) 324.390
CNS0095595Whole white alabastrum(diploid) 223.060
CNS0095596Whole white alabastrum(diploid) 327.876
CNS0095597Whole white alabastrum(diploid) 423.650
CNS0095598Silvery flower (diploied) 134.512
CNS0095599Silvery flower (diploied) 222.919
CNS0095600Silvery flower (diploied) 313.799
CNS0095601Golden flower (diploid) 124.809
CNS0095602Golden flower (diploid) 220.918
CNS0095603Golden flower (diploid) 318.547
CNS0095604Slightly white alabastrum(tetraploid) 132.570
CNS0095605Slightly white alabastrum(tetraploid) 230.238
CNS0095606Slightly white alabastrum(tetraploid) 352.985
CNS0095607Whole white alabastrum(tetraploid) 121.880
CNS0095608Whole white alabastrum(tetraploid) 219.953
CNS0095609Whole white alabastrum(tetraploid) 326.578
CNS0095610Silvery flower (tetraploid) 114.949
CNS0095611Silvery flower (tetraploid) 217.549
CNS0095612Silvery flower (tetraploid) 39.959
CNS0095613Golden flower (tetraploid) 15.346
CNS0095614Golden flower (tetraploid) 213.157
CNS0095615Golden flower (tetraploid) 34.499
CRA001975CRR073297Stem 165.738
CRR073298Stem 260.132
CRR073299Stem 355.019
CRR073300Leaf 146.737
CRR073301Leaf 251.217
CRR073302Leaf 336.421
CRR073303Juvenile bud 134.851
CRR073304Juvenile bud 225.218
CRR073305Juvenile bud 352.860
CRR073306Third green 14.043
CRR073307Third green 24.283
CRR073308Third green 36.408
CRR073309Second white 10.846
CRR073310Second white 22.477
CRR073311Second white 30.811
CRR073312Silver flowering 10.574
CRR073313Silver flowering 21.221
CRR073314Silver flowering 31.033
CRR073315Gold flowering 128.228
CRR073316Gold flowering 231.161
CRR073317Gold flowering 323.201
CRR073318Tawny withering 129.572
CRR073319Tawny withering 214.739
CRR073320Tawny withering 326.242