Detail information of GWHGAAZE007080


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011078878.10PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Sesamum indicum]
Swissprottr|Q8LG50|LPAT2_ARATH01-acyl-sn-glycerol-3-phosphate acyltransferase 2
trEMBLtr|L0HQD1|L0HQD1_9ERIC0sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AGB05602.1}
TAIR10AT3G57650.15E-146lysophosphatidyl acyltransferase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3780136137812059-
GWHAAZE00000002mRNA3780136137812059-
GWHAAZE00000002exon3780136137801603-
GWHAAZE00000002exon3780212137802204-
GWHAAZE00000002exon3780352837803620-
GWHAAZE00000002exon3780442537804550-
GWHAAZE00000002exon3780762537807783-
GWHAAZE00000002exon3780803337808110-
GWHAAZE00000002exon3780975337809812-
GWHAAZE00000002exon3781037137810444-
GWHAAZE00000002exon3781054937810588-
GWHAAZE00000002exon3781197937812059-
GWHAAZE00000002CDS3781197937812059-
GWHAAZE00000002CDS3781054937810588-
GWHAAZE00000002CDS3781037137810444-
GWHAAZE00000002CDS3780975337809812-
GWHAAZE00000002CDS3780803337808110-
GWHAAZE00000002CDS3780762537807783-
GWHAAZE00000002CDS3780442537804550-
GWHAAZE00000002CDS3780352837803620-
GWHAAZE00000002CDS3780212137802204-
GWHAAZE00000002CDS3780136137801603-
Transcript Sequence

Network for GWHGAAZE007080

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01553.22Acyltransferase421872.00E-16
PF16076.6Acyltransf_C1982701.20E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13523AGPAT3_4 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564
Phospholipase D signaling pathwaymap04072

Gene Ontology

GO term OntologyName
GO:0016746molecular_functiontransferase activity, transferring acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf34.466
SRR3591706second leaf35.595
SRR3591707mature leaf20.788
SRR3591708Shoot apex45.965
SRR3591709Stem35.815
SRR3591710White floral bud54.555
SRR3591711White flower78.525
SRR3591712Green floral bud68.235
SRR3591713Yellow flower76.385
SRP173429 SRR8316895Juvenile bud stage 55.405
SRR8316896Juvenile bud stage 80.578
SRR8316897Juvenile bud stage 32.088
SRR8316894Third green stage 27.335
SRR8316900Third green stage 66.459
SRR8316901Third green stage 64.137
SRR8316898Complete white stage 20.950
SRR8316899Complete white stage 64.387
SRR8316903Complete white stage 38.511
SRR8316902Silver flowering stage36.354
SRR8316904Silver flowering stage50.222
SRR8316905Silver flowering stage24.081
SRR8316906Gold flowering stage 119.137
SRR8316907Gold flowering stage 106.237
SRR8316908Gold flowering stage 124.091
SRP132670SRR6706286Control58.131
SRR6706287Light intensity 50%55.209
SRR6706288Light intensity 20%61.145
CNP0000432CNS0095592Slightly white alabastrum(diploid) 159.495
CNS0095593Slightly white alabastrum(diploid) 256.169
CNS0095594Slightly white alabastrum(diploid) 373.263
CNS0095595Whole white alabastrum(diploid) 252.796
CNS0095596Whole white alabastrum(diploid) 356.766
CNS0095597Whole white alabastrum(diploid) 450.211
CNS0095598Silvery flower (diploied) 153.089
CNS0095599Silvery flower (diploied) 242.707
CNS0095600Silvery flower (diploied) 379.295
CNS0095601Golden flower (diploid) 142.622
CNS0095602Golden flower (diploid) 270.413
CNS0095603Golden flower (diploid) 366.283
CNS0095604Slightly white alabastrum(tetraploid) 157.433
CNS0095605Slightly white alabastrum(tetraploid) 254.166
CNS0095606Slightly white alabastrum(tetraploid) 351.493
CNS0095607Whole white alabastrum(tetraploid) 160.843
CNS0095608Whole white alabastrum(tetraploid) 258.489
CNS0095609Whole white alabastrum(tetraploid) 369.071
CNS0095610Silvery flower (tetraploid) 190.125
CNS0095611Silvery flower (tetraploid) 278.643
CNS0095612Silvery flower (tetraploid) 371.497
CNS0095613Golden flower (tetraploid) 177.719
CNS0095614Golden flower (tetraploid) 289.410
CNS0095615Golden flower (tetraploid) 3135.153
CRA001975CRR073297Stem 1106.293
CRR073298Stem 296.751
CRR073299Stem 399.168
CRR073300Leaf 169.941
CRR073301Leaf 272.315
CRR073302Leaf 372.441
CRR073303Juvenile bud 164.630
CRR073304Juvenile bud 256.274
CRR073305Juvenile bud 367.353
CRR073306Third green 133.877
CRR073307Third green 230.889
CRR073308Third green 338.349
CRR073309Second white 163.988
CRR073310Second white 256.197
CRR073311Second white 366.488
CRR073312Silver flowering 198.485
CRR073313Silver flowering 293.290
CRR073314Silver flowering 386.263
CRR073315Gold flowering 133.995
CRR073316Gold flowering 237.085
CRR073317Gold flowering 337.865
CRR073318Tawny withering 193.862
CRR073319Tawny withering 244.510
CRR073320Tawny withering 3112.299