Detail information of GWHGAAZE007090


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004234831.10PREDICTED: guanylate kinase 2 [Solanum lycopersicum]
Swissprottr|Q9M682|GMK2_ARATH2E-165Guanylate kinase 2
trEMBLtr|K4BHA4|K4BHA4_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc03g063600.2.1}
TAIR10AT3G57550.27E-135guanylate kinase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3806666238071312-
GWHAAZE00000002mRNA3806666238071312-
GWHAAZE00000002exon3807131038071312-
GWHAAZE00000002exon3807109438071201-
GWHAAZE00000002exon3807087938070955-
GWHAAZE00000002exon3807065938070788-
GWHAAZE00000002exon3806960038069962-
GWHAAZE00000002exon3806790438068025-
GWHAAZE00000002exon3806767838067813-
GWHAAZE00000002exon3806705238067097-
GWHAAZE00000002exon3806685838066963-
GWHAAZE00000002exon3806666238066779-
GWHAAZE00000002CDS3807131038071312-
GWHAAZE00000002CDS3807109438071201-
GWHAAZE00000002CDS3807087938070955-
GWHAAZE00000002CDS3807065938070788-
GWHAAZE00000002CDS3806960038069962-
GWHAAZE00000002CDS3806790438068025-
GWHAAZE00000002CDS3806767838067813-
GWHAAZE00000002CDS3806705238067097-
GWHAAZE00000002CDS3806685838066963-
GWHAAZE00000002CDS3806666238066779-
Transcript Sequence

Network for GWHGAAZE007090

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01344.26Kelch_127647.60E-05
PF00625.22Guanylate_kin1353161.80E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00942E2.7.4.8, gmk Metabolic pathways map01100
Purine metabolismmap00230

Gene Ontology

GO term OntologyName
GO:0006163biological_processpurine nucleotide metabolic process
GO:0004385molecular_functionguanylate kinase activity
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf34.231
SRR3591706second leaf22.268
SRR3591707mature leaf24.425
SRR3591708Shoot apex17.042
SRR3591709Stem61.040
SRR3591710White floral bud87.411
SRR3591711White flower179.145
SRR3591712Green floral bud21.683
SRR3591713Yellow flower148.048
SRP173429 SRR8316895Juvenile bud stage 45.234
SRR8316896Juvenile bud stage 65.846
SRR8316897Juvenile bud stage 56.589
SRR8316894Third green stage 11.003
SRR8316900Third green stage 26.280
SRR8316901Third green stage 30.699
SRR8316898Complete white stage 40.374
SRR8316899Complete white stage 66.634
SRR8316903Complete white stage 54.781
SRR8316902Silver flowering stage110.057
SRR8316904Silver flowering stage108.258
SRR8316905Silver flowering stage62.906
SRR8316906Gold flowering stage 237.136
SRR8316907Gold flowering stage 225.395
SRR8316908Gold flowering stage 233.523
SRP132670SRR6706286Control31.463
SRR6706287Light intensity 50%37.750
SRR6706288Light intensity 20%28.786
CNP0000432CNS0095592Slightly white alabastrum(diploid) 157.440
CNS0095593Slightly white alabastrum(diploid) 245.802
CNS0095594Slightly white alabastrum(diploid) 347.431
CNS0095595Whole white alabastrum(diploid) 240.967
CNS0095596Whole white alabastrum(diploid) 37.302
CNS0095597Whole white alabastrum(diploid) 419.098
CNS0095598Silvery flower (diploied) 189.629
CNS0095599Silvery flower (diploied) 267.979
CNS0095600Silvery flower (diploied) 3229.206
CNS0095601Golden flower (diploid) 198.623
CNS0095602Golden flower (diploid) 2236.464
CNS0095603Golden flower (diploid) 3231.150
CNS0095604Slightly white alabastrum(tetraploid) 111.396
CNS0095605Slightly white alabastrum(tetraploid) 29.608
CNS0095606Slightly white alabastrum(tetraploid) 318.082
CNS0095607Whole white alabastrum(tetraploid) 110.298
CNS0095608Whole white alabastrum(tetraploid) 210.680
CNS0095609Whole white alabastrum(tetraploid) 314.236
CNS0095610Silvery flower (tetraploid) 1182.240
CNS0095611Silvery flower (tetraploid) 2153.194
CNS0095612Silvery flower (tetraploid) 394.128
CNS0095613Golden flower (tetraploid) 1143.748
CNS0095614Golden flower (tetraploid) 2136.887
CNS0095615Golden flower (tetraploid) 376.397
CRA001975CRR073297Stem 153.870
CRR073298Stem 238.943
CRR073299Stem 322.246
CRR073300Leaf 146.132
CRR073301Leaf 241.116
CRR073302Leaf 338.010
CRR073303Juvenile bud 136.618
CRR073304Juvenile bud 232.648
CRR073305Juvenile bud 329.542
CRR073306Third green 1115.443
CRR073307Third green 2124.025
CRR073308Third green 3134.548
CRR073309Second white 1142.205
CRR073310Second white 2181.644
CRR073311Second white 3161.825
CRR073312Silver flowering 1184.219
CRR073313Silver flowering 2165.518
CRR073314Silver flowering 3161.590
CRR073315Gold flowering 147.625
CRR073316Gold flowering 2104.921
CRR073317Gold flowering 353.284
CRR073318Tawny withering 148.241
CRR073319Tawny withering 295.578
CRR073320Tawny withering 345.203