Gene detail

Detail information of GWHGAAZE007097

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011075237.1	6.2988E-122	PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Sesamum indicum]
Swissprot	tr\|Q8VZ42\|SAP11_ARATH	4E-104	Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
trEMBL	tr\|F6HL00\|F6HL00_VITVI	4E-120	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB55138.1}
TAIR10	AT2G41835.1	3E-84	zinc finger (C2H2 type, AN1-like) family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	38193975	38197468	+
GWHAAZE00000002	mRNA	38193975	38197468	+
GWHAAZE00000002	exon	38193975	38194106	+
GWHAAZE00000002	exon	38196785	38197468	+
GWHAAZE00000002	CDS	38193975	38194106	+
GWHAAZE00000002	CDS	38196785	38197468	+

Transcript Sequence
>GWHTAAZE007105 ATGGGAACTCCAGCATTCCCGAATCTGGGAAAACATTGCTCCGTGGGAGATTGCAAGTTGATTGACTTTTTGCCCTTCACCTGTGATTGTTGCCACCAGGTCCCCCCCCTTCTTTCTTTCTCTCTTAAAATCGTTTTCTGTCTAGAGCATCGGAGCTACATTGGCCACCATTGTCCAAAATCTAACAAACACGACGTTACCGTAGCCGTTTGCCCGCTTTGTGCTAAAGGGGTCCGCTTAATCCCTGATGAAGACCCAAACATCACATGGGAATCACACGTGAATACTGAATGTGACCCGTCAAACTACGAAAAAGCCACAAAGAAAATAAAATGCCCTGTCCCCCGGTGCAAAGAAGCCCTAACATTCTCCAACATGGTCAAGTGCAGAGATTGCACCATTGAGCATTGCCTAAAACACCGGTTCGGACCAGACCACAATTGTCCAGGACCGAAGAAACCCGACCCAGTCACACCTTCGTCCATGTGGGCCTTGAGCTTAGCCAAGGTAGCTTCGTCCATTCGTGGACTGAGCCAGGGTTTGATGGGGGACGGTTCTGAGCAAAGGGTTACAAATGGCAACAAGGGAAATATGAGTGGTGGGAAAGTGGAAAAGTGTCCATTGTGCAATGTTAGGTTCGGGTCAACCACGGCTATGGTGGAACACGTGGAAAAGACGCATAAAAATAATGGGACACGCGCGGGTGTGATGAAGGTGACAATTGATGTTTGTCCAAAGTGTAGTAAGGGTTTTCGCGATCCAGTCGCACTTGTGAAGCATCTTGACAAGGATCATGGTGGCACTTCAAAAGCTTAA

Network for GWHGAAZE007097

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01428.17	zf-AN1	112	152	1.90E-08

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	C2H2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003676	molecular_function	nucleic acid binding
GO:0008270	molecular_function	zinc ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	7.713
	SRR3591706	second leaf	2.470
	SRR3591707	mature leaf	3.027
	SRR3591708	Shoot apex	6.961
	SRR3591709	Stem	6.413
	SRR3591710	White floral bud	32.092
	SRR3591711	White flower	7.863
	SRR3591712	Green floral bud	27.743
	SRR3591713	Yellow flower	7.718
SRP173429	SRR8316895	Juvenile bud stage	11.398
	SRR8316896	Juvenile bud stage	17.864
	SRR8316897	Juvenile bud stage	13.313
	SRR8316894	Third green stage	2.059
	SRR8316900	Third green stage	12.790
	SRR8316901	Third green stage	16.049
	SRR8316898	Complete white stage	2.167
	SRR8316899	Complete white stage	9.538
	SRR8316903	Complete white stage	2.531
	SRR8316902	Silver flowering stage	2.767
	SRR8316904	Silver flowering stage	3.933
	SRR8316905	Silver flowering stage	1.328
	SRR8316906	Gold flowering stage	6.259
	SRR8316907	Gold flowering stage	5.003
	SRR8316908	Gold flowering stage	6.246
SRP132670	SRR6706286	Control	15.314
	SRR6706287	Light intensity 50%	14.441
	SRR6706288	Light intensity 20%	13.865
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	11.704
	CNS0095593	Slightly white alabastrum(diploid) 2	11.974
	CNS0095594	Slightly white alabastrum(diploid) 3	10.272
	CNS0095595	Whole white alabastrum(diploid) 2	26.799
	CNS0095596	Whole white alabastrum(diploid) 3	30.776
	CNS0095597	Whole white alabastrum(diploid) 4	30.791
	CNS0095598	Silvery flower (diploied) 1	5.020
	CNS0095599	Silvery flower (diploied) 2	16.642
	CNS0095600	Silvery flower (diploied) 3	10.153
	CNS0095601	Golden flower (diploid) 1	13.318
	CNS0095602	Golden flower (diploid) 2	14.382
	CNS0095603	Golden flower (diploid) 3	13.010
	CNS0095604	Slightly white alabastrum(tetraploid) 1	17.332
	CNS0095605	Slightly white alabastrum(tetraploid) 2	19.176
	CNS0095606	Slightly white alabastrum(tetraploid) 3	8.976
	CNS0095607	Whole white alabastrum(tetraploid) 1	42.854
	CNS0095608	Whole white alabastrum(tetraploid) 2	51.550
	CNS0095609	Whole white alabastrum(tetraploid) 3	25.907
	CNS0095610	Silvery flower (tetraploid) 1	6.098
	CNS0095611	Silvery flower (tetraploid) 2	9.575
	CNS0095612	Silvery flower (tetraploid) 3	15.317
	CNS0095613	Golden flower (tetraploid) 1	9.365
	CNS0095614	Golden flower (tetraploid) 2	5.703
	CNS0095615	Golden flower (tetraploid) 3	12.226
CRA001975	CRR073297	Stem 1	12.683
	CRR073298	Stem 2	13.026
	CRR073299	Stem 3	6.892
	CRR073300	Leaf 1	20.327
	CRR073301	Leaf 2	17.422
	CRR073302	Leaf 3	12.849
	CRR073303	Juvenile bud 1	21.249
	CRR073304	Juvenile bud 2	24.268
	CRR073305	Juvenile bud 3	6.139
	CRR073306	Third green 1	9.003
	CRR073307	Third green 2	11.341
	CRR073308	Third green 3	10.750
	CRR073309	Second white 1	5.427
	CRR073310	Second white 2	3.679
	CRR073311	Second white 3	5.203
	CRR073312	Silver flowering 1	11.595
	CRR073313	Silver flowering 2	9.273
	CRR073314	Silver flowering 3	6.149
	CRR073315	Gold flowering 1	13.395
	CRR073316	Gold flowering 2	9.369
	CRR073317	Gold flowering 3	8.531
	CRR073318	Tawny withering 1	11.784
	CRR073319	Tawny withering 2	13.758
	CRR073320	Tawny withering 3	12.142