Detail information of GWHGAAZE007173


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007028513.14.50319E-84Type-a response regulator [Theobroma cacao]
Swissprottr|O80366|ARR9_ARATH1E-77Two-component response regulator ARR9
trEMBLtr|A0A061EV85|A0A061EV85_THECC2E-84Type-a response regulator {ECO:0000313|EMBL:EOY09015.1}
TAIR10AT3G57040.13E-62response regulator 9

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3969841339700135-
GWHAAZE00000002mRNA3969841339700135-
GWHAAZE00000002exon3970003039700135-
GWHAAZE00000002exon3969981839699921-
GWHAAZE00000002exon3969964939699726-
GWHAAZE00000002exon3969931239699382-
GWHAAZE00000002exon3969859939698773-
GWHAAZE00000002exon3969841339698487-
GWHAAZE00000002CDS3970003039700135-
GWHAAZE00000002CDS3969981839699921-
GWHAAZE00000002CDS3969964939699726-
GWHAAZE00000002CDS3969931239699382-
GWHAAZE00000002CDS3969859939698773-
GWHAAZE00000002CDS3969841339698487-
Transcript Sequence

Network for GWHGAAZE007173

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00072.25Response_reg111415.10E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
K14492ARR-A Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0000160biological_processphosphorelay signal transduction system

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.640
SRR3591706second leaf22.716
SRR3591707mature leaf112.728
SRR3591708Shoot apex18.335
SRR3591709Stem33.573
SRR3591710White floral bud20.158
SRR3591711White flower63.726
SRR3591712Green floral bud40.969
SRR3591713Yellow flower18.694
SRP173429 SRR8316895Juvenile bud stage 4.923
SRR8316896Juvenile bud stage 11.331
SRR8316897Juvenile bud stage 4.288
SRR8316894Third green stage 16.364
SRR8316900Third green stage 47.332
SRR8316901Third green stage 42.890
SRR8316898Complete white stage 9.465
SRR8316899Complete white stage 18.510
SRR8316903Complete white stage 12.798
SRR8316902Silver flowering stage11.858
SRR8316904Silver flowering stage21.206
SRR8316905Silver flowering stage8.704
SRR8316906Gold flowering stage 10.753
SRR8316907Gold flowering stage 14.479
SRR8316908Gold flowering stage 17.735
SRP132670SRR6706286Control3.826
SRR6706287Light intensity 50%4.918
SRR6706288Light intensity 20%4.016
CNP0000432CNS0095592Slightly white alabastrum(diploid) 139.645
CNS0095593Slightly white alabastrum(diploid) 245.886
CNS0095594Slightly white alabastrum(diploid) 330.858
CNS0095595Whole white alabastrum(diploid) 252.749
CNS0095596Whole white alabastrum(diploid) 365.104
CNS0095597Whole white alabastrum(diploid) 433.990
CNS0095598Silvery flower (diploied) 120.721
CNS0095599Silvery flower (diploied) 222.125
CNS0095600Silvery flower (diploied) 331.484
CNS0095601Golden flower (diploid) 19.892
CNS0095602Golden flower (diploid) 211.390
CNS0095603Golden flower (diploid) 312.317
CNS0095604Slightly white alabastrum(tetraploid) 126.311
CNS0095605Slightly white alabastrum(tetraploid) 226.073
CNS0095606Slightly white alabastrum(tetraploid) 343.134
CNS0095607Whole white alabastrum(tetraploid) 114.232
CNS0095608Whole white alabastrum(tetraploid) 210.945
CNS0095609Whole white alabastrum(tetraploid) 318.716
CNS0095610Silvery flower (tetraploid) 113.357
CNS0095611Silvery flower (tetraploid) 220.390
CNS0095612Silvery flower (tetraploid) 329.638
CNS0095613Golden flower (tetraploid) 110.800
CNS0095614Golden flower (tetraploid) 211.536
CNS0095615Golden flower (tetraploid) 39.471
CRA001975CRR073297Stem 19.326
CRR073298Stem 219.998
CRR073299Stem 37.057
CRR073300Leaf 118.008
CRR073301Leaf 219.998
CRR073302Leaf 312.526
CRR073303Juvenile bud 16.809
CRR073304Juvenile bud 22.419
CRR073305Juvenile bud 32.707
CRR073306Third green 10.857
CRR073307Third green 22.322
CRR073308Third green 32.305
CRR073309Second white 11.250
CRR073310Second white 22.369
CRR073311Second white 32.478
CRR073312Silver flowering 11.308
CRR073313Silver flowering 20.086
CRR073314Silver flowering 31.666
CRR073315Gold flowering 13.102
CRR073316Gold flowering 22.545
CRR073317Gold flowering 30.508
CRR073318Tawny withering 12.149
CRR073319Tawny withering 20.565
CRR073320Tawny withering 33.319