Detail information of GWHGAAZE007181


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010056065.14.421E-178PREDICTED: vacuolar amino acid transporter 1-like isoform X1 [Eucalyptus grandis]
trEMBLtr|A0A059DHL3|A0A059DHL3_EUCGR3E-175Uncharacterized protein {ECO:0000313|EMBL:KCW90042.1}
TAIR10AT2G41190.19E-123Transmembrane amino acid transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3987180139876639+
GWHAAZE00000002mRNA3987180139876639+
GWHAAZE00000002exon3987180139872080+
GWHAAZE00000002exon3987305039873264+
GWHAAZE00000002exon3987479839874821+
GWHAAZE00000002exon3987493539875115+
GWHAAZE00000002exon3987617139876390+
GWHAAZE00000002exon3987647739876639+
GWHAAZE00000002CDS3987180139872080+
GWHAAZE00000002CDS3987305039873264+
GWHAAZE00000002CDS3987479839874821+
GWHAAZE00000002CDS3987493539875115+
GWHAAZE00000002CDS3987617139876390+
GWHAAZE00000002CDS3987647739876639+
Transcript Sequence

Network for GWHGAAZE007181

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans853422.90E-41
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.215
SRR3591706second leaf1.154
SRR3591707mature leaf11.808
SRR3591708Shoot apex0.121
SRR3591709Stem0.413
SRR3591710White floral bud35.297
SRR3591711White flower21.520
SRR3591712Green floral bud47.434
SRR3591713Yellow flower13.779
SRP173429 SRR8316895Juvenile bud stage 9.804
SRR8316896Juvenile bud stage 13.902
SRR8316897Juvenile bud stage 7.974
SRR8316894Third green stage 9.159
SRR8316900Third green stage 54.359
SRR8316901Third green stage 39.131
SRR8316898Complete white stage 25.312
SRR8316899Complete white stage 31.683
SRR8316903Complete white stage 44.516
SRR8316902Silver flowering stage32.521
SRR8316904Silver flowering stage61.842
SRR8316905Silver flowering stage35.678
SRR8316906Gold flowering stage 86.575
SRR8316907Gold flowering stage 92.955
SRR8316908Gold flowering stage 91.263
SRP132670SRR6706286Control37.566
SRR6706287Light intensity 50%33.829
SRR6706288Light intensity 20%32.389
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.657
CNS0095593Slightly white alabastrum(diploid) 211.108
CNS0095594Slightly white alabastrum(diploid) 310.216
CNS0095595Whole white alabastrum(diploid) 244.232
CNS0095596Whole white alabastrum(diploid) 355.899
CNS0095597Whole white alabastrum(diploid) 456.034
CNS0095598Silvery flower (diploied) 115.575
CNS0095599Silvery flower (diploied) 224.126
CNS0095600Silvery flower (diploied) 385.845
CNS0095601Golden flower (diploid) 123.528
CNS0095602Golden flower (diploid) 270.911
CNS0095603Golden flower (diploid) 367.425
CNS0095604Slightly white alabastrum(tetraploid) 139.283
CNS0095605Slightly white alabastrum(tetraploid) 228.137
CNS0095606Slightly white alabastrum(tetraploid) 329.398
CNS0095607Whole white alabastrum(tetraploid) 175.408
CNS0095608Whole white alabastrum(tetraploid) 288.137
CNS0095609Whole white alabastrum(tetraploid) 365.396
CNS0095610Silvery flower (tetraploid) 1111.339
CNS0095611Silvery flower (tetraploid) 2110.361
CNS0095612Silvery flower (tetraploid) 3104.704
CNS0095613Golden flower (tetraploid) 151.216
CNS0095614Golden flower (tetraploid) 274.987
CNS0095615Golden flower (tetraploid) 354.160
CRA001975CRR073297Stem 110.375
CRR073298Stem 210.098
CRR073299Stem 37.268
CRR073300Leaf 127.123
CRR073301Leaf 222.527
CRR073302Leaf 310.442
CRR073303Juvenile bud 132.170
CRR073304Juvenile bud 223.576
CRR073305Juvenile bud 320.153
CRR073306Third green 136.410
CRR073307Third green 240.305
CRR073308Third green 334.355
CRR073309Second white 140.479
CRR073310Second white 237.457
CRR073311Second white 342.264
CRR073312Silver flowering 132.727
CRR073313Silver flowering 219.229
CRR073314Silver flowering 326.470
CRR073315Gold flowering 117.575
CRR073316Gold flowering 222.457
CRR073317Gold flowering 314.064
CRR073318Tawny withering 114.995
CRR073319Tawny withering 210.452
CRR073320Tawny withering 310.294