Detail information of GWHGAAZE007206


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002315099.28.97751E-64hypothetical protein POPTR_0010s18450g [Populus trichocarpa]
trEMBLtr|B9HYE6|B9HYE6_POPTR3E-64Uncharacterized protein {ECO:0000313|EMBL:EEF01270.2}
TAIR10AT2G40070.20.00000004Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene4052570740527207+
GWHAAZE00000002mRNA4052570740527207+
GWHAAZE00000002exon4052570740525883+
GWHAAZE00000002exon4052616740527207+
GWHAAZE00000002CDS4052570740525883+
GWHAAZE00000002CDS4052616740527207+
Transcript Sequence

Network for GWHGAAZE007206

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.157
SRR3591706second leaf0.176
SRR3591707mature leaf0.067
SRR3591708Shoot apex0.245
SRR3591709Stem0.462
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.091
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.774
SRR8316896Juvenile bud stage 2.382
SRR8316897Juvenile bud stage 0.510
SRR8316894Third green stage 0.849
SRR8316900Third green stage 3.822
SRR8316901Third green stage 3.156
SRR8316898Complete white stage 0.080
SRR8316899Complete white stage 1.875
SRR8316903Complete white stage 0.165
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.028
SRR8316905Silver flowering stage0.018
SRR8316906Gold flowering stage 0.039
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.017
SRP132670SRR6706286Control1.911
SRR6706287Light intensity 50%2.547
SRR6706288Light intensity 20%2.853
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.413
CNS0095593Slightly white alabastrum(diploid) 22.408
CNS0095594Slightly white alabastrum(diploid) 30.723
CNS0095595Whole white alabastrum(diploid) 22.498
CNS0095596Whole white alabastrum(diploid) 34.109
CNS0095597Whole white alabastrum(diploid) 41.482
CNS0095598Silvery flower (diploied) 11.087
CNS0095599Silvery flower (diploied) 20.379
CNS0095600Silvery flower (diploied) 30.243
CNS0095601Golden flower (diploid) 11.446
CNS0095602Golden flower (diploid) 20.325
CNS0095603Golden flower (diploid) 30.221
CNS0095604Slightly white alabastrum(tetraploid) 11.044
CNS0095605Slightly white alabastrum(tetraploid) 20.368
CNS0095606Slightly white alabastrum(tetraploid) 31.351
CNS0095607Whole white alabastrum(tetraploid) 10.689
CNS0095608Whole white alabastrum(tetraploid) 20.693
CNS0095609Whole white alabastrum(tetraploid) 31.298
CNS0095610Silvery flower (tetraploid) 11.241
CNS0095611Silvery flower (tetraploid) 21.379
CNS0095612Silvery flower (tetraploid) 30.210
CNS0095613Golden flower (tetraploid) 10.401
CNS0095614Golden flower (tetraploid) 20.641
CNS0095615Golden flower (tetraploid) 30.156
CRA001975CRR073297Stem 14.320
CRR073298Stem 22.571
CRR073299Stem 31.107
CRR073300Leaf 14.647
CRR073301Leaf 25.867
CRR073302Leaf 30.982
CRR073303Juvenile bud 11.601
CRR073304Juvenile bud 20.155
CRR073305Juvenile bud 30.831
CRR073306Third green 10.000
CRR073307Third green 20.049
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.004
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.916
CRR073316Gold flowering 21.285
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.610
CRR073319Tawny withering 20.068
CRR073320Tawny withering 30.124