Gene detail

Detail information of GWHGAAZE007235

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010247227.1	3.89221E-49	PREDICTED: cytochrome P450 94B3 [Nelumbo nucifera]
Swissprot	tr\|P98188\|C94A2_VICSA	3E-26	Cytochrome P450 94A2
trEMBL	tr\|A0A059DGX3\|A0A059DGX3_EUCGR	6E-48	Uncharacterized protein {ECO:0000313\|EMBL:KCW89998.1}
TAIR10	AT3G56630.1	2E-35	cytochrome P450, family 94, subfamily D, polypeptide 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	41003874	41004281	-
GWHAAZE00000002	mRNA	41003874	41004281	-
GWHAAZE00000002	exon	41003874	41004281	-
GWHAAZE00000002	CDS	41003874	41004281	-

Transcript Sequence
>GWHTAAZE007243 ATGGACATGTTCTCTATCCAGACTTTCCTCTTACCTTTGATCTTATTCTTCTTCTGTCTCTACATTTTCCTCAAACCAAAACATAAAACAACCACCATCACCACCACCGTCAACAATGGCTACAAAACGTACCCAATTGTCGGAGCCCTACCGGAGTTCCTCCTCAACCGCCACCGTTTTCTCGACTGGAGCACCGAAGTCCTCTCCAGAACCCCCACAAACACCTCCGTGTTCCACCGCCCCGGCAAAATCAAAGGCCTATTCACGGCGAACCCATTGAACGTGGAGCACATGCTCAAAACAAATTTCGAGAACTACCCAAAAGGCCCTGCATTCATCAAACTCCTCGAAGATTTCCTCGGCGGAGGAATCTTCAATGCCGACGGCGATCTCTGGAAGGTACTCTAA

Network for GWHGAAZE007235

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	4.655
	SRR3591706	second leaf	46.329
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	27.929
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	2.682
	SRR3591711	White flower	1.662
	SRR3591712	Green floral bud	7.744
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	3.562
	SRR8316896	Juvenile bud stage	2.713
	SRR8316897	Juvenile bud stage	1.828
	SRR8316894	Third green stage	3.275
	SRR8316900	Third green stage	1.559
	SRR8316901	Third green stage	1.506
	SRR8316898	Complete white stage	0.671
	SRR8316899	Complete white stage	2.760
	SRR8316903	Complete white stage	0.511
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.409
	SRR8316905	Silver flowering stage	0.295
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.582
	SRR6706287	Light intensity 50%	1.190
	SRR6706288	Light intensity 20%	0.929
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.634
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	1.300
	CNS0095595	Whole white alabastrum(diploid) 2	0.298
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.349
	CNS0095598	Silvery flower (diploied) 1	2.907
	CNS0095599	Silvery flower (diploied) 2	1.042
	CNS0095600	Silvery flower (diploied) 3	0.343
	CNS0095601	Golden flower (diploid) 1	1.034
	CNS0095602	Golden flower (diploid) 2	0.161
	CNS0095603	Golden flower (diploid) 3	0.742
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.445
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.747
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.622
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.899
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.460
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.060
	CNS0095612	Silvery flower (tetraploid) 3	0.125
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	2.560
	CRR073298	Stem 2	4.631
	CRR073299	Stem 3	3.477
	CRR073300	Leaf 1	3.082
	CRR073301	Leaf 2	3.295
	CRR073302	Leaf 3	0.374
	CRR073303	Juvenile bud 1	0.151
	CRR073304	Juvenile bud 2	0.877
	CRR073305	Juvenile bud 3	1.019
	CRR073306	Third green 1	0.092
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.175
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	5.382
	CRR073316	Gold flowering 2	1.239
	CRR073317	Gold flowering 3	5.600
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000